CI01000034_03656686_03659087


Basic Information

Item Value
gene id CI01000034_03656686_03659087
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3656686 ~ 3659172 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03656686_03659087.mRNA
GCGGTAGTGTAGTTAAGCTGCAGGAGATTAGGAAGCTCAGTCCAGACCAGCGCCTGAGGGAGAAGAGAGCAGACACTAAGCAACCGAGAGAGATCAAACCATCACAGTCTGGATCAAACGTTCAATTACACAGATCAGACACAGACCTGTTAGAGGAGACACGGGTGACTCTTCTTATACCTGCTTTAGCAGTTACTAGACGTCATAACACCCACTGCTGTCTTGTACCTTCCATCCTTCCTCTCTGGCTTTTCTCTTCCCTCATTTCTCCCCCTGATGAGTTCAGTTCGCCTGGCCTGTTTTCACTTGGTGTTGATTTGGCCGAGGTGGAAAAAGGTGTCAATGAGGCATGTTGTATGTTAATGTCTTGTGTTGGGTTGTGTATTAATTACAAGATCGTAACACTGGGCACTGATGAGCACAGCCAATCAGGGACTCGAATTGATGTAGCGGATCCTCCCACACTGAGCACCTGGGCCTGACCATTTGGTTTTGCATATATTTGTTTTTGCAGGTCACATTTGCCAGGTTGCTTAAGAGGTTCTTCAAGACATAAACCGCAGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03656686_03659087.mRNA True 567 mRNA 0.47 5 3656686 3659172

Neighbor

gene id symbol gene type direction distance location
CI01000034_03556390_03566045 NA coding upstream 90161 3554625 ~ 3566525 (+)
CI01000034_03533995_03552021 SPOP coding upstream 104581 3533995 ~ 3552105 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L coding upstream 218853 3432846 ~ 3438839 (+)
CI01000034_03422028_03431218 SLC35B1, S35B1 coding upstream 225090 3421289 ~ 3431596 (+)
CI01000034_03407574_03419313 FAM117A, FAM117AA coding upstream 237295 3405952 ~ 3419391 (+)
CI01000034_03670122_03684523 NA coding downstream 10771 3669943 ~ 3685216 (+)
CI01000034_03855726_03858565 NA coding downstream 196379 3855551 ~ 3859311 (+)
CI01000034_03869116_03883535 SLC4A1A coding downstream 209944 3869116 ~ 3883690 (+)
CI01000034_03887718_03890074 NA coding downstream 227993 3887165 ~ 3890409 (+)
CI01000034_03890532_03897571 UBTF coding downstream 231266 3890438 ~ 3899195 (+)
G170339 NA non-coding upstream 49763 3606701 ~ 3606923 (+)
G170336 NA non-coding upstream 53458 3603014 ~ 3603228 (+)
G170332 NA non-coding upstream 56470 3600004 ~ 3600216 (+)
G170330 NA non-coding upstream 57747 3598702 ~ 3598939 (+)
G170328 NA non-coding upstream 58809 3597678 ~ 3597877 (+)
G170420 NA non-coding downstream 176925 3836097 ~ 3836354 (+)
G170432 NA non-coding downstream 188396 3847568 ~ 3847818 (+)
G170435 NA non-coding downstream 191395 3850567 ~ 3850890 (+)
G170437 NA non-coding downstream 196760 3855932 ~ 3856175 (+)
G169806 NA other upstream 1318996 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 1925509 1729413 ~ 1731179 (+)
G169340 NA other upstream 2345808 1250219 ~ 1310878 (+)
G169394 NA other upstream 2463126 1150297 ~ 1193560 (+)
CI01000034_04125435_04125780 RPRML other downstream 465928 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 535466 4192311 ~ 4200636 (+)

Expression


Co-expression Network