CI01000034_03670122_03684523


Basic Information

Item Value
gene id CI01000034_03670122_03684523
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3669943 ~ 3685216 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03670122_03684523.mRNA
ATATATATAGTGAGGAAAAAGTATTGCAAATAGTTGACTCTAGTTTTATACTGCACAGTTTACACATCAGAAAACTTGTATACTGTATACACACTGCAAAAACAGTATAGTATGGCTTTCCAAACATAGCCTGAAGGAGAGAGAAGGTGGGATGAGCTGGAGGAACAGCATCTCCGATAATGAAGAAGGCATCTGGAGAGCAGGCAGATGACATTCAAAACCAGAATGAGAAAGACAAGTGTAGAAGAGAGAGTGGGAGCTGGGAGAAAGAGAACAATGCAAGCAGTTTAGAGAAGAGTAGGGAGATGACCGGTGTGGGCCTGTCAGCTCCAGAGGCAATAAACAGGCATTTAAAGCGACAGCTTATCTTGAAAAGGGAGAGCCATGCCAATGATGCCCATCTCTGGGAAGGAGATGAACTGTTGGTCGATCTAGGGGACAGTCTCAGAAATTTTTTGTACAGTAAATCTGGCCAGACAAGGCAGCAGACCGTGAGGGACAAGAGAGGCCTCGTTGAACAGCCGCTCACCAAGCACGCTGTCCCGTTGAGGAGCAGCAGGATGAAGCTGTGGTCGGAGCGCATCTCGTCGTTGTCCTGCTGTCGACAGCTCTTCGTTCAAGAAGACGCGGTTCCTCCGGTACCGTATCCAAAACAGGCGAGACCCGGTCCCATGTCCAACAAAAAGTCAAGCGCGAGCTTTCCTCTGAGTGGAATCCCACCTGCTGTCTGTCACGGTAAACTCCCGCTACTTGGAGCTCGTCACATCCAAAGGTGTGTGGAAACTGACAAGACACTTAATCGCTGCAATCTGCGTACACTGCTCCGTTTCGTGTTGCTGTGTGAAGGGAATCATCTTCGTTATCCGCGCTTTTATGTGCTGGTGACGGTTAGGATCCCAGTGCGCGAGCCTGACCGGAGCGCAAACTCCTCGAGCGTCGCGCATATCAGTACATGCAGACTGGCAGCAGGGCTCCTACATACGCTGACGTTTTAAACCCCCCTCTCTCTTTCTCTCTCCCTCGTCAGAGCCCCAATCATCCTTTTTCACCCTTTCTCTTCTTCTTCTTCCCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCAAAACACCCATCTATCTCTCTGTCCTCCTGCCTTTCTTCCTTCACCCTGTCAACACCTTAATTCCCTCTCTTTTCTAAACCTAAATCACAATAGTCAGCTTCAGTCTTTTATATGACAAAATCCGCAATAATGCATTGCTTGGTAAATTTATCAATACATATCCCTGGATATGAATTCTTTGTTCTTCCAGGAACAACATTCCTGTTAACCAATCATTACCCATTAACTTTAGGGTTAAAAGGATAGTTCACCCACAATATATTTCTCTCTCCCCCCCTCCCCCATTTAGTTACCCTCATATAATTTCAAACTTTATTTCACCCTCAGTCACAATTGGCTTTCATTGCATCTTTTCCCCCCCATGCAATGGAAGCCAATAGTGACTGATGCTTTCGTTCTGCCTAATATCTTTTGTTTTCCTCAGAAAAAGAAAATAGTATATGGTTTTGGAACAACATTAAGGTGAGTACATTGTTATATTGAATGTTATTGGATAACCTATTGATAAGTGACTAACATGCACTTTGTCTAGGAGCATGTTCCTCTCACGTTGTGCTGACAGAAGCGTCACAGGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03670122_03684523.mRNA True 1688 mRNA 0.46 4 3669943 3685216

Neighbor

gene id symbol gene type direction distance location
CI01000034_03656686_03659087 NA coding upstream 10771 3656686 ~ 3659172 (+)
CI01000034_03556390_03566045 NA coding upstream 103418 3554625 ~ 3566525 (+)
CI01000034_03533995_03552021 SPOP coding upstream 117838 3533995 ~ 3552105 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L coding upstream 232110 3432846 ~ 3438839 (+)
CI01000034_03422028_03431218 SLC35B1, S35B1 coding upstream 238347 3421289 ~ 3431596 (+)
CI01000034_03855726_03858565 NA coding downstream 170335 3855551 ~ 3859311 (+)
CI01000034_03869116_03883535 SLC4A1A coding downstream 183900 3869116 ~ 3883690 (+)
CI01000034_03887718_03890074 NA coding downstream 201949 3887165 ~ 3890409 (+)
CI01000034_03890532_03897571 UBTF coding downstream 205222 3890438 ~ 3899195 (+)
CI01000034_03900854_03907256 ATXN7L3 coding downstream 215638 3900854 ~ 3908450 (+)
G170339 NA non-coding upstream 63020 3606701 ~ 3606923 (+)
G170336 NA non-coding upstream 66715 3603014 ~ 3603228 (+)
G170332 NA non-coding upstream 69727 3600004 ~ 3600216 (+)
G170330 NA non-coding upstream 71004 3598702 ~ 3598939 (+)
G170328 NA non-coding upstream 72066 3597678 ~ 3597877 (+)
G170420 NA non-coding downstream 150881 3836097 ~ 3836354 (+)
G170432 NA non-coding downstream 162352 3847568 ~ 3847818 (+)
G170435 NA non-coding downstream 165351 3850567 ~ 3850890 (+)
G170437 NA non-coding downstream 170716 3855932 ~ 3856175 (+)
G169806 NA other upstream 1332253 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 1938766 1729413 ~ 1731179 (+)
G169340 NA other upstream 2359065 1250219 ~ 1310878 (+)
G169394 NA other upstream 2476383 1150297 ~ 1193560 (+)
CI01000034_04125435_04125780 RPRML other downstream 439884 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 509422 4192311 ~ 4200636 (+)

Expression


Co-expression Network