CI01000034_03855726_03858565


Basic Information

Item Value
gene id CI01000034_03855726_03858565
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3855551 ~ 3859311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03855726_03858565.mRNA
GTATATAAACTAAAGCTCGAAATATGATGCATCTGTGCCTCTCGTCTGAAACTTTTCACTTGCCCTGTCAAAACCATATGAGTCCATATGACATCATCATAATGAGCCCATAATGGTGTAATATGGCTTCAAATCACCGTGTCTCATTTGAAACCCACCTGGCTCTTAATGACAAATGACACAGCAAATCAGTGCACTATTCTGTGAAAATGACTTCAGGGTCTATTCGTTGTCAGATAAAAACTCTTACACAACCAAACATATGTTGAGAAGCATAATTGCATTCAGATCAGATTCAGACTCTTTTGTGTTGCAGTGGTGGATGAGGGTACGAGCCCCGCTTTCAGGAGCTCAAGCAGGGAGCTTTGAGATCGAGATCAATGGAAAACTGATTTTCTCAAAGCTGGAAACCAGTGGCTTCCCCTATGAGGATGATATTATGGATGCTATCCAAAGAGCCTACGATGGCCAGCCGGTGGAGAAGATCACCAAGAGCCAGCCTCCTTGTGTCATCCTCTAAAGTTTCACCTCTTAACCCTTCACTTTTGGCTCTCAAGACACCTGAATCACTCCTTGCAGACGTCTAAAATGTCAACATTTTCAACGGTTCTGTTTTAAAAGCAAAACATAAGCATCTAGAGAGAGTGTTTTGGTGCAGGATCCTTAAATGTCCCCTTCTCTTCACTCCTCCTTTCTGGGTGCTGGACATAAATGATTATCGTAACTCTAAAGCAAGCAGTTATGGTATGAGGCCTGCAGTCTGTGCATCCTTTAAGCAGGAGGAGAAAGATGAGGGGACAGTGAGGAGGAGGCCACTGGAAGGGTTAAAGGGATAGTTCACCCAAAAATGGAAATTCTGTCATCTATTCACCCTCATGTTGTTCCAAACCTGTTTGAGTTTCTTTCTTCTGTTAGACACACAAGATATTTTGAAGAATGTTGGTAACCAGACAGTTGATGGACCCCAGTGACTTCCAGAGTATATTATTTTTTCCTCCTAAGGAAGTCAATGGCTGCCGTCTACTGTTTGCTTACCAACATTCTTCAAAATATCATCTTTTGTCTTCAGCAGAAGAAAGAAACTCAAACAGGTTTGGAAAAATTTAATTTTTGGGTGAACTATCTCCCCCCTTTTTTTTTTTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTAAAGCCACATTGCCTACTGGAGTCACTGTTCATCTGCTTTTTTTTTTTTTTTTTTTTAGTTTTGGATGTGTAATGTGTGATGTACTAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03855726_03858565.mRNA False 1266 mRNA 0.40 4 3855551 3859311

Neighbor

gene id symbol gene type direction distance location
CI01000034_03670122_03684523 NA coding upstream 170335 3669943 ~ 3685216 (+)
CI01000034_03656686_03659087 NA coding upstream 196379 3656686 ~ 3659172 (+)
CI01000034_03556390_03566045 NA coding upstream 289026 3554625 ~ 3566525 (+)
CI01000034_03533995_03552021 SPOP coding upstream 303446 3533995 ~ 3552105 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L coding upstream 417718 3432846 ~ 3438839 (+)
CI01000034_03869116_03883535 SLC4A1A coding downstream 9805 3869116 ~ 3883690 (+)
CI01000034_03887718_03890074 NA coding downstream 27854 3887165 ~ 3890409 (+)
CI01000034_03890532_03897571 UBTF coding downstream 31127 3890438 ~ 3899195 (+)
CI01000034_03900854_03907256 ATXN7L3 coding downstream 41543 3900854 ~ 3908450 (+)
CI01000034_03923671_03931871 NA coding downstream 63201 3922512 ~ 3931903 (+)
G170435 NA non-coding upstream 4661 3850567 ~ 3850890 (+)
G170432 NA non-coding upstream 7733 3847568 ~ 3847818 (+)
G170420 NA non-coding upstream 19197 3836097 ~ 3836354 (+)
G170342 NA non-coding upstream 165848 3609344 ~ 3689703 (+)
G170339 NA non-coding upstream 248628 3606701 ~ 3606923 (+)
G170211 NA non-coding downstream 1480 3860791 ~ 3865433 (+)
G170443 NA non-coding downstream 81029 3940340 ~ 3940807 (+)
G170444 NA non-coding downstream 81864 3941175 ~ 3941400 (+)
G170459 NA non-coding downstream 116456 3975767 ~ 3975989 (+)
G170226 NA non-coding downstream 153188 4012499 ~ 4016560 (+)
G169806 NA other upstream 1517861 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2124374 1729413 ~ 1731179 (+)
G169340 NA other upstream 2544673 1250219 ~ 1310878 (+)
G169394 NA other upstream 2661991 1150297 ~ 1193560 (+)
CI01000034_04125435_04125780 RPRML other downstream 265789 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 335327 4192311 ~ 4200636 (+)
G170437 NA non-coding upstream 1029 3855932 ~ 3856175 (+)

Expression


Co-expression Network