CI01000034_03956763_03960891


Basic Information

Item Value
gene id CI01000034_03956763_03960891
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3956763 ~ 3960891 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_03956763_03960891.mRNA
ATGATACATCTCGAGAATTTCAGTTTCTTGGCTTTAGTTCACTCTCCTATAAGAACAAATTCGAGCAGAGCACAACCTCTTCATTGTGACAGCACCTCATGCCCAATACTACACCATTATCAGTCTGATTGGGTGTGGGCTGAGTGCTCGTATGTTGGGAATCTGCAGAATTCCTCTGTGTTTTGGGGGAAAATTCCCTCTCGCCAGAGGAGGGTGATACTGGGAGGGTTGAGGGGATCTCTTGGCAGCTCTACCGCAGGTCTTGTGATCGGAGCTCAGTGGTCATGGGGTGGCCTGGCACTGCACCCCCCTCGAGGTCCAGGATACAAGACGAGAGAGACAGCAGGTGGAGTAGGCATTGCTGCCACTCAATTGTGTAAAACGGTGAACGATGTCACAGTGTTTGGCACCGCCTCAGCCAGCAAGCACGAGGTCATCAGCCAGGGTGGAGTCACGCACCCCATCGACTACAGGACACGTGATTACGTAGAGGAGATCCGTAAAATAAGCCCCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_03956763_03960891.mRNA True 517 mRNA 0.52 5 3956763 3960891

Neighbor

gene id symbol gene type direction distance location
CI01000034_03915853_03921269 ASB16 coding downstream 35494 3915751 ~ 3921269 (-)
CI01000034_03911480_03913846 TMUB2 coding downstream 42917 3911075 ~ 3913846 (-)
CI01000034_03803160_03827982 NGFRA coding downstream 128781 3802832 ~ 3827982 (-)
CI01000034_03659420_03661699 NXPH3 coding downstream 295064 3659290 ~ 3661699 (-)
CI01000034_03577874_03611044 NA coding downstream 345664 3577454 ~ 3611099 (-)
CI01000034_04019323_04045212 MRC2 coding upstream 58349 4019240 ~ 4045212 (-)
CI01000034_04065210_04081772 TLK2 coding upstream 103628 4064519 ~ 4081772 (-)
CI01000034_04087755_04088054 NA coding upstream 126672 4087563 ~ 4088764 (-)
CI01000034_04090497_04095923 NA coding upstream 129341 4090232 ~ 4095923 (-)
CI01000034_04101415_04114654 ITGB3A coding upstream 139731 4100622 ~ 4114654 (-)
G172316 NA non-coding downstream 19297 3934545 ~ 3937466 (-)
G172303 NA non-coding downstream 24146 3931628 ~ 3932617 (-)
G172312 NA non-coding downstream 25478 3928905 ~ 3931285 (-)
G172314 NA non-coding downstream 82381 3870728 ~ 3874382 (-)
G172346 NA non-coding downstream 105861 3850581 ~ 3850902 (-)
G172298 NA non-coding upstream 51609 4012500 ~ 4016694 (-)
G172366 NA non-coding upstream 85784 4046675 ~ 4047140 (-)
G172297 NA non-coding upstream 103001 4063892 ~ 4064161 (-)
G172378 NA non-coding upstream 155592 4116483 ~ 4116934 (-)
G172379 NA non-coding upstream 156088 4116979 ~ 4117214 (-)
G172151 NA other downstream 558950 3391144 ~ 3451802 (-)
G172016 NA other downstream 720148 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 1445242 2510061 ~ 2511521 (-)
G171835 NA other downstream 1510470 2441821 ~ 2446293 (-)
G171755 NA other downstream 2090390 1864118 ~ 1866373 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 205608 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 255321 4216212 ~ 4221881 (-)
G172593 NA other upstream 1032069 4992960 ~ 4994943 (-)
G172800 NA other upstream 1828141 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1836679 5795835 ~ 5811781 (-)

Expression


Co-expression Network