CI01000034_04087755_04088054


Basic Information

Item Value
gene id CI01000034_04087755_04088054
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4087563 ~ 4088764 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04087755_04088054.mRNA
AGAAGAATTCGCAGGGCAATGTAGAAACAACAGACAATAGAAGCAAAACCCAGGGGTAAAGAGATATTGAGACGGTATTTAGATACTTTTGTTTTGATCCTCTGTGAACCTTTTTGTCCTTTTTAAAACGTTATTTCTTCAGATTTTCTTGAAGTTATTGGTTATTTCAATCAATCGCACACCTCTAATAATTGAGCTAGAAGGATAACTTGTTAACCATGCCAATTCATCATGTAATCTTCAAATAATGTATAATATGCTGAAACAAGATTAAAAATTCAAGGGAATCCTGTCAAAATGAATCTTTAAATCATATTAGAGGTGCAACGGATGGGATTTAACTAAAATATAATTAGGTGGTTGTATCGTTGTAATAGTTTGGATGGGTGATTAGTTAGGAAGTATATGGAGTTGTTCAACGTTCTTCATACGTTCAACGTGTGTGTATATATATATATATATATAATTTTTTTTTTTTTTGTTGTTGTTGTTGTTTCTCCTCAGCAACCTTCTCGGAAAATGTTTATAATAGTGTATGATTTTGCACCGATTTCATTTGTTTTCTGGTCGCGAACAAGTCTGACTGATATTGATTAAAAATCAATGTTTCTTTGTTAAATGCACTACAGGTTACGTGTTGCATGTGCTTTGACATGAATTGATCTGTCGCAAGATCTTGCATGATTCCCCGTAGGTTATCAATAGGATAAATGGCATTAGGTTGGATTGAGTTAATGACTGAATTAGTGGTGGTGGCGAGGCTGAGTCATGAATCTCAGAATGCTCTCGAAAACATGTATTGGGGACACATGACTCAACATGTCATACACATCACTGTCCCGTCAATCTGTCAGCATCACTATGGCTACATAATGCCATGCACACTCTCTCTTCCTCTCTCTCCAGCCATGATGGAGGAATTGCACAGCTTGGATCCTCGCAGGCAGGAGCTGCTGGAGGCCCGTTTCACAGGAGTCGGAGTTGCCAAGGTCTGTCCGGTCTCAAACTGATACATTTCTGCCCCCATTTCTATCTGTTTATGATCACCAGTAATTCCTGCACATACCTTACCTCTCACATTAGACCTCATCATCTTCACTCATTCGTGTGTTTGTCTAGGCTCTGGGCCTGTCCGCTTTCATGCATTCAGTTACATGTTAAGTTCACTTTTCCTCTTGCTTCTGCCCAGCTGTCTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04087755_04088054.mRNA True 1202 mRNA 0.39 1 4087563 4088764

Neighbor

gene id symbol gene type direction distance location
CI01000034_04065210_04081772 TLK2 coding downstream 5791 4064519 ~ 4081772 (-)
CI01000034_04019323_04045212 MRC2 coding downstream 42351 4019240 ~ 4045212 (-)
CI01000034_03956763_03960891 NA coding downstream 126672 3956763 ~ 3960891 (-)
CI01000034_03915853_03921269 ASB16 coding downstream 166294 3915751 ~ 3921269 (-)
CI01000034_03911480_03913846 TMUB2 coding downstream 173717 3911075 ~ 3913846 (-)
CI01000034_04090497_04095923 NA coding upstream 1468 4090232 ~ 4095923 (-)
CI01000034_04101415_04114654 ITGB3A coding upstream 11858 4100622 ~ 4114654 (-)
CI01000034_04154954_04164874 NA coding upstream 65887 4154651 ~ 4164874 (-)
CI01000034_04165535_04172272 KCTD13 coding upstream 76609 4165373 ~ 4172272 (-)
CI01000034_04174469_04189564 SEZ6L2 coding upstream 85652 4174416 ~ 4189564 (-)
G172297 NA non-coding downstream 23402 4063892 ~ 4064161 (-)
G172366 NA non-coding downstream 40423 4046675 ~ 4047140 (-)
G172298 NA non-coding downstream 70869 4012500 ~ 4016694 (-)
G172316 NA non-coding downstream 150097 3934545 ~ 3937466 (-)
G172303 NA non-coding downstream 154946 3931628 ~ 3932617 (-)
G172378 NA non-coding upstream 27719 4116483 ~ 4116934 (-)
G172379 NA non-coding upstream 28215 4116979 ~ 4117214 (-)
G172384 NA non-coding upstream 36355 4125119 ~ 4126846 (-)
G172398 NA non-coding upstream 113049 4201813 ~ 4202052 (-)
G172402 NA non-coding upstream 123690 4212454 ~ 4212802 (-)
G172151 NA other downstream 689750 3391144 ~ 3451802 (-)
G172016 NA other downstream 850948 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 1576042 2510061 ~ 2511521 (-)
G171835 NA other downstream 1641270 2441821 ~ 2446293 (-)
G171755 NA other downstream 2221190 1864118 ~ 1866373 (-)
CI01000034_04216451_04218876 NA other upstream 127448 4216212 ~ 4221881 (-)
G172593 NA other upstream 904196 4992960 ~ 4994943 (-)
G172800 NA other upstream 1700268 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1708806 5795835 ~ 5811781 (-)

Expression


Co-expression Network