CI01000034_04451917_04454531


Basic Information

Item Value
gene id CI01000034_04451917_04454531
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4451459 ~ 4454531 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04451917_04454531.mRNA
AGTCTAATGTAAGCAGTGACAAGACCAGCATGCAGCTGTCAGACCTGCAGCCGTGCCGGCAGTACCAGGCCTGGGTGAGCGCTGTGAGCACTGCTGGTGAAGGCAAGAGGAGCGTCACCACTTTTTCCACCACTAATGAAAACCGTTTTGTTACCTCAATACTGTTGGCTGTATTCATACCATTGATGTTAGTTTTTGCTTTTATCTTCCTATTGTTACGTTACTGTTCTCAGAAGATCCCAGATCCATTAAACAGTAAATCATTTAAACATGTGAACTTTCAGCACACGTGGCCATGGCTCTCTTCTCCAACAGAATTGACTGTGAAGATCTCTGAGCTGGAGATTGTGGAGAACCTGCATCCCGACACACCTTCCCCTCCCTCAGAGATTGAGCTGGAGAAGATTTTAATTGATGTGAAACCCAAACATTTTCAGGTGCCAAATGGACTGGGCAAAACAAATGAAGGTACGGAGAAGTGGTTAGAAGACTCTGAGGAATCAAACAGAGGAAACATTTCAAAGCAGGACAGCTGGAAAAAAGAGTACAGTGAGATGGTTGATACTGATGAAGAGGAGGATGACGGCAGCAGTGGTGAAGAGTGGTGGGACCAGCAGTGTGTCTCGGACTATGAAAGACATTTTATGCCACCTGTTGAGGTGAATTAACTCTGCTGTTTCATACCTCATGATGATTTGTACTGTAGTGCCTTAAATAGAACAATCAGAAACATGATTGATTTTACTGAAGAACTCTTTAATCATGTACTGAAAATAGTATTAAGGCGTTATTCGTGAAATTCCAAATGCGTCTGTGGGAGAGATCTCGCAGAGCTATACACAGATTTTCACATTTACAGTCTTCCAAACTAAAGTTGAAGTACAATTTTTGCGCCATTGTTGAACCATTGTTGGGCTGTTTGGAACATTGCACAGCTCCACAGTCCCTTGTGCTTTACACTTTTCAGGGAATTCAGACTATAAATGTTTTACGGTCTCTGCACATTAAACCTTGTTCAAAAAAAGGTTTTTTAAACATCGAAAACCTTGCGTACGTGACACAAATGAGACTGTATTACTGGTAGATATCTACAATTGATTGTAACAAAGTTTTTGTACATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04451917_04454531.mRNA True 1126 mRNA 0.41 4 4451459 4454531

Neighbor

gene id symbol gene type direction distance location
CI01000034_04431146_04446849 SMARCA4A, SMARCA4 coding downstream 4291 4431146 ~ 4447168 (-)
CI01000034_04392399_04400096 LDLR, LDLRA coding downstream 51363 4392200 ~ 4400096 (-)
CI01000034_04376314_04386958 NA coding downstream 64501 4376314 ~ 4386958 (-)
CI01000034_04370706_04374491 SPC24 coding downstream 76046 4370626 ~ 4375413 (-)
CI01000034_04350907_04363668 NA coding downstream 87776 4350606 ~ 4363683 (-)
CI01000034_04466151_04467388 RLN3A coding upstream 11321 4465852 ~ 4467480 (-)
CI01000034_04630595_04640739 NA coding upstream 176010 4630541 ~ 4640987 (-)
CI01000034_04652096_04678983 TMEM104 coding upstream 197403 4651934 ~ 4679037 (-)
CI01000034_04690669_04706837 NA coding upstream 235956 4690487 ~ 4706959 (-)
CI01000034_04710539_04725888 TNPO2, TNPO2.S coding upstream 254882 4709413 ~ 4725888 (-)
G172456 NA non-coding downstream 42222 4405635 ~ 4409237 (-)
G172480 NA non-coding downstream 94905 4356313 ~ 4356554 (-)
G172475 NA non-coding downstream 116686 4334149 ~ 4334773 (-)
G172422 NA non-coding downstream 159713 4291531 ~ 4291746 (-)
G172421 NA non-coding downstream 160605 4290653 ~ 4290854 (-)
G172488 NA non-coding upstream 14403 4468934 ~ 4469211 (-)
G172504 NA non-coding upstream 44473 4499004 ~ 4499747 (-)
G172507 NA non-coding upstream 61340 4515871 ~ 4516396 (-)
G172508 NA non-coding upstream 61962 4516493 ~ 4516717 (-)
G172509 NA non-coding upstream 62372 4516903 ~ 4517633 (-)
CI01000034_04216451_04218876 NA other downstream 233717 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 279289 4165373 ~ 4172272 (-)
G172151 NA other downstream 1053646 3391144 ~ 3451802 (-)
G172016 NA other downstream 1214844 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 1939938 2510061 ~ 2511521 (-)
G172593 NA other upstream 538429 4992960 ~ 4994943 (-)
G172800 NA other upstream 1334501 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1343039 5795835 ~ 5811781 (-)

Expression


Co-expression Network