CI01000034_04630595_04640739


Basic Information

Item Value
gene id CI01000034_04630595_04640739
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4630541 ~ 4640987 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04630595_04640739.mRNA
AGTGGCGATCAATGAATCATAAGAGATAAACATTGAAATTTTAGTTTTATGGGATATAACATCAGCTTGTATGCTGATTAATTAATTAATTAATTATTGATCTCATTAATTAGCAGATTTTCTGCAATAATGAGTTAACAAGTCATCCAGGTGGAACAAATTATTATCTACTTAAAAACCTGGTGGGTTTGAAACTTTAGCTTTCATGGTTAGGTTGGCTTTCTTAGTGGCTTAGTTTGTGTTATATAATGGGCTTGATTAAACTTATTGTTTTGGTGGTTCTTTATCCCCAATTGGTATGGCATGTATTCGGCTCCTCAGTTGAAGAGGGATCCTTAGATTTCTCCTGGAGTGATTTTGAGAGGGATGGAAAAAAAGGCAATCAGGTCAATGTATCCAGTTCAAACTCTCTCCACCTGCATGGCAACTTCAGCCAGGATGCCACTGAGGGGTTGAGTTCTTTGAATGCCACCTTCACCCAGGATGCTGCTGAGGGGTCTGGTTCTTTCAACGCCACATTCAGCCTGGACGATGAAGTGGGGTCCGGTCCTGTCAACGCCACCTTCAGCCAGGATTCCACTGAGGGGTCCGGCCCTGTCAACGCCACCGTCAGCCAGGATGCTACTGAGGGGTCTGGTCCTATGAATGCCACTTTCAGCCAGGATGTCGCTGAGGGGTCCAGATCTGTGAATGCCACCTTTAGCCAAGACACTGCTGAGGGGTCCGGTTCTGTCAACGCTACTTTCAGCCAGGATTCTGCTGAGGGGTCCGGTTCTGTGAACTCCACCTTGAGCCAGGATGACGCTGAGGGGTCCAGATCTGTGAATGCCACCTTTAGCCAAGACGCTGCTGAGGGGTCCGGTTCTTTGAATGCCACATTCAGCCAGGATTCTGCTGAGGGGTCCGGTTCTGTGAATGCCACATTCAGCCAGGACGCCGCTGAGGGGTCCGGTTCTTGTTTCCTGTTTGCATTAACACTGCTTTCAGTTGACTGGGTTGGCTGTATCAGGGCAATTATTTACTGGCTTGCTGGAAAGGTGGCATCCTGTGACAGTACAATTTTGACCTTCATTGTGTGGGTCATTCTTATGGCAGTGTTAATGGATGTTAAATGCTGCCAGCCATCAAATCCTCTATTAGAATGTTTTTGGACATTGTAAACACTGGGTACCTCTGCAGTTAGTTAACAACACACATCTGCCACCCTAAATAAA

Function

NR:

description
hyosophorin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04630595_04640739.mRNA True 1214 mRNA 0.46 4 4630541 4640987

Neighbor

gene id symbol gene type direction distance location
CI01000034_04466151_04467388 RLN3A coding downstream 163061 4465852 ~ 4467480 (-)
CI01000034_04451917_04454531 NA coding downstream 176010 4451459 ~ 4454531 (-)
CI01000034_04431146_04446849 SMARCA4A, SMARCA4 coding downstream 183373 4431146 ~ 4447168 (-)
CI01000034_04392399_04400096 LDLR, LDLRA coding downstream 230445 4392200 ~ 4400096 (-)
CI01000034_04376314_04386958 NA coding downstream 243583 4376314 ~ 4386958 (-)
CI01000034_04652096_04678983 TMEM104 coding upstream 10947 4651934 ~ 4679037 (-)
CI01000034_04690669_04706837 NA coding upstream 49500 4690487 ~ 4706959 (-)
CI01000034_04710539_04725888 TNPO2, TNPO2.S coding upstream 68426 4709413 ~ 4725888 (-)
CI01000034_04823597_04824920 NA coding upstream 182334 4823321 ~ 4825135 (-)
CI01000034_04870434_04878415 SLC5A11 coding upstream 229374 4870361 ~ 4878415 (-)
G172551 NA non-coding downstream 8154 4622142 ~ 4622387 (-)
G172542 NA non-coding downstream 22325 4607979 ~ 4608216 (-)
G172541 NA non-coding downstream 22765 4607523 ~ 4607776 (-)
G172539 NA non-coding downstream 24094 4606073 ~ 4606447 (-)
G172535 NA non-coding downstream 30077 4600248 ~ 4600464 (-)
G172626 NA non-coding upstream 200278 4841265 ~ 4841496 (-)
G172627 NA non-coding upstream 202467 4843454 ~ 4845428 (-)
G172633 NA non-coding upstream 306894 4947881 ~ 4948092 (-)
G172609 NA non-coding upstream 343891 4984878 ~ 4986139 (-)
CI01000034_04988799_04990480 MSRB1A, MSRB1 non-coding upstream 346352 4988681 ~ 4990480 (-)
CI01000034_04216451_04218876 NA other downstream 412799 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 458371 4165373 ~ 4172272 (-)
G172151 NA other downstream 1232728 3391144 ~ 3451802 (-)
G172016 NA other downstream 1393926 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 2119020 2510061 ~ 2511521 (-)
G172593 NA other upstream 351973 4992960 ~ 4994943 (-)
G172800 NA other upstream 1148045 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1156583 5795835 ~ 5811781 (-)

Expression


Co-expression Network