CI01000034_04951993_04959847


Basic Information

Item Value
gene id CI01000034_04951993_04959847
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4951530 ~ 4959847 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04951993_04959847.mRNA
GTGTTCGCCTTGGTCAAGTGCGTTTGCCAGCCATCTGTTATCATAAATTATCGATGCAAATAAGCTACTGTGAGTATATCAGGTTAAACAGGTTGAACTTGTCGAGGTTTCAGCCGCACAAATGCACTTGCAGCACCAAGAAACTACACGCGGAAAGACACAAACATGAACAGTCAAAAGTTAATGAGGTTAATCATCGGTGGCTTGGTGATTGTTGCCATGATGAAAATATTCTTAAGCCTCAGGTGAGGATTGCAGTTCTCAAAGGTTTTCATGTACACATATGTGTCTATGCACCTTTCAAACCAGGCTTCATTGTCCCAAAGAAGCTTGTAACTGCAGTTTATTTATTTTCTATTTATAGCTCAAGCAAAGGCGCAAGTGGAAAGACACACCAAGTCATACAAGGTGGTAAGTTCTGGGCTAGCCAGCGTATTCCACAGCTGAATTTGGATAAAAATCAGGAGGATCCTGTCAAAATAGAACATGCAGACCCAGAGGTTGACCCAGAGGTTGACCCAGAAGTTCACCCAGAGGTTCAGCCAGAGAAAAAAGACACGATTCAATCAAAGGAAGAGGAGTTGGAACCAGAAATTCCTGACAATACACCGAAAGATCCACTAAAGATTGTGCACTTGGATCTGAAAGGTGCACCACCCAAAGTCAAATATCTCAGAGAGATATTCCCTCTACTGTCATCTCTGGGTGCTAATGGGATATTGCTGGAATATGAGGATATGTTTCCCTATGAGGGGAAACTCGCAATTCTCAAATCAAGCTTTGCATACAGTCCGGAAGATATAGAGGAAATTAAGTCACTGGCCAAACAGCACAAGCTTGAACTAATTCCTCTGGTGCAGTTTGTGTTAAAACACGAGAAGTATTTCAGATTGAGAGAAGTGGAAACGTTTCCCAATAGTATAAACCCTCTGGCCCCAGGAAGCATTGACCTTGTTCAAGACATGTTAACGCAAGTTATGAACAAGCACCCGGAAGCAGAGTGGTTCCACATTGGTGCTGACGAGGTGCGTGGGCTGGGCGAGAGCGAAGATTCCAAGCGCTGGTTGGAAGCCAACAATGGAGACATGGCAAAGCTGTTCTTCAATCATGTGACCGCAGTGGGGAGATTTATGACCAATCTGAAGAGAGGAATCAAGCTGATCTTGTGGGATGACATGTTTAGGAAGCTCAGCTCCGACTCTATTAAAGCATCGGGATTGCAAGATCTCGCATCGCCCATGATCTGGACGTACAGCCCAAACATGGATGTGAAAGCGATCGGTAATTATATCGCTAAGTATGAGGAGGCTGGATTTCATCACGTGTGGTTTGCTAGCGCTTTTAAAGGAGCCTCTGGAATTGACCAGATGTGGACTCCAATTGATCACCATTTAAAAAACCACCTACAGTGGCAACAAGTCATTACGTCAATGCCGCAGTACAAGTCTGTGAGATTTCAAGGCATTGTGCTGGCTGGCTGGCAGAGTCTAGTAAATGAATCTGCATTGTATATCAACAACAGTAGACTATTATTGTTAATGAAAAACAACGTATGTTTAAGGTATGAGCATCACACTGTGCTGTGTGAGCTTCTCCCTGTGGCCATCCCTTCACTGGCTGTCTGTCTTCAGACACTGAAATATGGTTCATTTGATGCCAAGGCACAGAGTGAGGTACAACGCATCCTTGGCTGTGAAATTGAGCTAAGCAACAATGAGTGTAAGGGTGTGTCCTTTCCTGGCTCAGATGTTTATGAAATGGTGAAGAAGATCAAAAACAACCTTGACAGCTCAGTCAAAAAGATCATGGACAGCTACCACGTCAGGGGATCATTCAGTTCTTATAATCGCAAACATAACTTTGCAAACCCACGAAATCTTGGATTTTTCAAAGATGATCTGAAAAAGTTGATGAATGAATGGGATTCCTTTTTACTATCTTTCCGGCAAAGTATGGAGGCTATCTTCTACCCAGACACATTAGAGGAGTGGTTGGAAGAGAACGTCAACGAACACATAGAAAGACTTGGTGAAATGGTGGTTGACGTAGAACGAATCATTGCACTCAATGGGAAGCCAAAGGCAGATCCCGTAAAAACTAGGTGAAACAGACAACCAGACCAACAGGAAGGACATTCCAAAATGTGACTTTCAAACCTGTTGTGCTCAGTAATGGGTGTTTTTTTCCATCTCAGGAATCTTGCTTATTTCTTGAAGGCCTCAATGGAAGTGATAACACTAAAAAAAATGCAGTACTCTAAAAAAAAAACCAAAAAAAAACCCTCTAATTACACTATGTATGCACTTCTTGAAGAAGTGGACTCTCTACACTGTGCATTGATGCTGTTTTCGTACTTGAGTTAATGTAAATGATTTACCTCTGCAGTTAAATTGGTACTACTAATTTTTTTTATTATCATAAATGTCTAGGGATCAAACTTCATCTCTTTAACATGCAAGGTGTATTTTGTACATTTGTGTCATTTGGGAAGCCCGAATATTGTGCAATTATGCTCAAAGGCAAAATGTGCAATCCTTAAGAAATGTTATAATTGAGTGCCTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04951993_04959847.mRNA True 2568 mRNA 0.42 13 4951530 4959847

Neighbor

gene id symbol gene type direction distance location
CI01000034_04921458_04934523 E4F1 coding downstream 17007 4921169 ~ 4934523 (-)
CI01000034_04887739_04917230 GRID2IPA coding downstream 34300 4887717 ~ 4917230 (-)
CI01000034_04870434_04878415 SLC5A11 coding downstream 73115 4870361 ~ 4878415 (-)
CI01000034_04823597_04824920 NA coding downstream 126395 4823321 ~ 4825135 (-)
CI01000034_04710539_04725888 TNPO2, TNPO2.S coding downstream 225642 4709413 ~ 4725888 (-)
CI01000034_04978655_04981311 HAGH, HAGH.L, HAGHL coding upstream 18227 4978074 ~ 4981311 (-)
CI01000034_04988799_04990480 MSRB1A, MSRB1 coding upstream 28834 4988681 ~ 4990480 (-)
CI01000034_04997343_04999344 RPS2, RS2 coding upstream 37471 4997318 ~ 4999344 (-)
CI01000034_05006303_05007855 NA coding upstream 46270 5006117 ~ 5007861 (-)
CI01000034_05093584_05096564 NA coding upstream 133215 5093062 ~ 5096564 (-)
G172633 NA non-coding downstream 3438 4947881 ~ 4948092 (-)
G172627 NA non-coding downstream 106102 4843454 ~ 4845428 (-)
G172626 NA non-coding downstream 110034 4841265 ~ 4841496 (-)
G172551 NA non-coding downstream 329143 4622142 ~ 4622387 (-)
G172542 NA non-coding downstream 343314 4607979 ~ 4608216 (-)
G172609 NA non-coding upstream 25031 4984878 ~ 4986139 (-)
G172643 NA non-coding upstream 92553 5052400 ~ 5052726 (-)
G172644 NA non-coding upstream 93279 5053126 ~ 5053360 (-)
G172645 NA non-coding upstream 93860 5053707 ~ 5054597 (-)
CI01000034_04216451_04218876 NA other downstream 733788 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 779360 4165373 ~ 4172272 (-)
G172151 NA other downstream 1553717 3391144 ~ 3451802 (-)
G172016 NA other downstream 1714915 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 2440009 2510061 ~ 2511521 (-)
G172593 NA other upstream 33113 4992960 ~ 4994943 (-)
G172800 NA other upstream 829185 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 837723 5795835 ~ 5811781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location