CI01000034_04978655_04981311 (HAGH, HAGH.L, HAGHL)


Basic Information

Item Value
gene id CI01000034_04978655_04981311
gene name HAGH, HAGH.L, HAGHL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4978074 ~ 4981311 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04978655_04981311.mRNA
TTCCCACAGCCTGGTTTCACTCCGCTCTTAGGAAGTCATCTCTGGTGGAACAGTCAGACATGAAGGTCGAACTGCTTCCTGCTCTCACCGACAACTACATGTACCTCCTCATCGATGAAGACACGAAGGAAGCAGCCATAGTCGATCCAGTAGAGCCCCAGAAAGTTGTAGATGCGGTCAAAAAGCATGGTGTGAAGCTCAAGACTGTCCTGACCACTCATCATCACTGGGATCATGCTGGAGGTAACGAGAAGCTGGTGAAGCTCATGCCGGGACTGACAGTGTATGGCGGAGATGACAGAGTGGGAGCTTTAACTCAGAAAGTCACACACTACAACACTTTCAAAGTGGGCTCTCTGAATGTAAAGTGTTTGTTTACGCCGTGTCACACCACTGGCCACATCTGCTATTTTGTAACAAAAGAAAACAGCACTGAACCACCAGCTGTGTTTACGGGTGATACTCTGTTTGTGGCTGGCTGTGGGAAGTTTTTTGAAGGTACCGCTGATGAGATGTACAAAGCCCTGATCGAGGTTTTAGGCCGTCTTCCTCCAGAGACGGTAACAATTCCCACTTCTAAACTCAAATCTCTGTCTTTGTGCTAAACTCTTACTGTAAAAACAGTTATTTTAGGTAATATAAAGTCGCATGTTCTAAACTCCCAGTTTCCTTTGGTTTCAGCGTGTGTACTGTGGGCACGAGTACACTATAAATAATCTGAAATTTGCACGGCATGTTGAGCCAAAAAACGAGGCCGTCCGGACAAAGTTAGCATGGGCTAAGGTGTTTAACTCTTCTTTAACATACATTTACTTAGGCTGCAAATACTGTCATTGTGCAAGTGTTTGAATAACCTTGTCTTACATTGATTAGGAAAAATATGATAACGGAGAGCCAACCATTCCTTCTACGGTGGCTGATGAGTTCACATTTAACCCCTTCATGAGAGTGAGGTATGTGAAATCATTCCCAAATATACATCATATAGACTGTCTTGCACTTTACTTGTTTGTGCATTTCACATGATCTTGACACACGAGTTAACTTGGAATATTGCTGATAAAATTTTAGCATGGGTTTGGAACTTAGTGAAAAACATTATGGGACTAAAACGAAACAAATAAAATGAGACAAAATAGAAAAAAATATATATAGAATAATAAAACATTTTAAAATCTATATTAAA

Function

symbol description
hagh Predicted to enable hydroxyacylglutathione hydrolase activity and metal ion binding activity. Predicted to act upstream of or within methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione. Predicted to be located in mitochondrial matrix. Is expressed in gut; intestinal bulb; and liver. Orthologous to human HAGH (hydroxyacylglutathione hydrolase).
haghl Predicted to enable hydroxyacylglutathione hydrolase activity and metal ion binding activity. Predicted to be involved in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01069 gloB, gloC, HAGH; hydroxyacylglutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04978655_04981311.mRNA True 1186 mRNA 0.41 5 4978074 4981311

Neighbor

gene id symbol gene type direction distance location
CI01000034_04951993_04959847 NA coding downstream 18227 4951530 ~ 4959847 (-)
CI01000034_04921458_04934523 E4F1 coding downstream 43551 4921169 ~ 4934523 (-)
CI01000034_04887739_04917230 GRID2IPA coding downstream 60844 4887717 ~ 4917230 (-)
CI01000034_04870434_04878415 SLC5A11 coding downstream 99659 4870361 ~ 4878415 (-)
CI01000034_04823597_04824920 NA coding downstream 152939 4823321 ~ 4825135 (-)
CI01000034_04988799_04990480 MSRB1A, MSRB1 coding upstream 7370 4988681 ~ 4990480 (-)
CI01000034_04997343_04999344 RPS2, RS2 coding upstream 16007 4997318 ~ 4999344 (-)
CI01000034_05006303_05007855 NA coding upstream 24806 5006117 ~ 5007861 (-)
CI01000034_05093584_05096564 NA coding upstream 111751 5093062 ~ 5096564 (-)
CI01000034_05147520_05150640 WFIKKN2, WFIKKN2A coding upstream 165695 5147006 ~ 5150640 (-)
G172633 NA non-coding downstream 29982 4947881 ~ 4948092 (-)
G172627 NA non-coding downstream 132646 4843454 ~ 4845428 (-)
G172626 NA non-coding downstream 136578 4841265 ~ 4841496 (-)
G172551 NA non-coding downstream 355687 4622142 ~ 4622387 (-)
G172542 NA non-coding downstream 369858 4607979 ~ 4608216 (-)
G172609 NA non-coding upstream 3567 4984878 ~ 4986139 (-)
G172643 NA non-coding upstream 71089 5052400 ~ 5052726 (-)
G172644 NA non-coding upstream 71815 5053126 ~ 5053360 (-)
G172645 NA non-coding upstream 72396 5053707 ~ 5054597 (-)
CI01000034_04216451_04218876 NA other downstream 760332 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 805904 4165373 ~ 4172272 (-)
G172151 NA other downstream 1580261 3391144 ~ 3451802 (-)
G172016 NA other downstream 1741459 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 2466553 2510061 ~ 2511521 (-)
G172593 NA other upstream 11649 4992960 ~ 4994943 (-)
G172800 NA other upstream 807721 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 816259 5795835 ~ 5811781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026263 hagh coding NC_007114.7 CM002887.2 18774511 ~ 18792534 (-)