CI01000034_05006303_05007855


Basic Information

Item Value
gene id CI01000034_05006303_05007855
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 5006117 ~ 5007861 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_05006303_05007855.mRNA
ATCAACATGAACTTTGTTTTCTTCTTCACCATGGCATTTCTTGTTCTGGGCTTAGTCAGAGGATGTATAGTAGATGTCCAACAGCCAACGAAGCTCATGAGAAGAAAAGAGCAAGAGTCTGTCTCTATTCCCTGCTCTGTCAATGTATCCAGCTGTCAACACACACCTCAGATCTCTTGGTACGTGTTCCGGAAAGACAATCACTACCAGATTGATGTGTCAAGCCAGCCACAGAAATACAAACTGGATCATCATGATCTGGAAATCAGCTCTTTGTCAAAAACAGACTGTGGGGTGTATTACTGTGCAGCAGCTCTGCTCACTGTGGCTCACAGTGGGGCGCAAGCAATCGGACAGGGAACCACTTTGAAAGTGTCAGAGAGGGGCTTAAACGTCCGTCAAGCACTGCTTTTGACATTGCTAGTCCTGCTAACAGTGTACAGCCTCCTCGTCCTGGGCATCATCATCTGCATTAAGGAGGACTCTGCTAGGCCAGTAGTGCTTTTCAGTGGAGTGGTGCAAGAACTGAGCAAGAGGAACTTAAGTGGTGACAAAATTCAGGCACGCGACAAAGTTTCCCAAGACAAGTCTAAAGGTCTTCAAAATGTGTACGATAGTGAAGATGTTTACCAAAATCTTGATGAGTAAAGGAAATCGAATGCCCTAATCCATGCCTGCCCTGCTGATCTAAAAACCTGCAACTTCCTGCAAACCTGAAAGCTAAGTTCAGAGAAAGCGGTTGGCTGACCCAGAGTTTTGATGACCTTTCTCTTTTCATGTGATTTCTTCATGTGATTTCTCATTCCATGTGACCCCTCTTGCTATGTCATTACA

Function

NR:

description
Immunoglobulin superfamily member 6 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_05006303_05007855.mRNA True 834 mRNA 0.45 5 5006117 5007861

Neighbor

gene id symbol gene type direction distance location
CI01000034_04997343_04999344 RPS2, RS2 coding downstream 6773 4997318 ~ 4999344 (-)
CI01000034_04988799_04990480 MSRB1A, MSRB1 coding downstream 15637 4988681 ~ 4990480 (-)
CI01000034_04978655_04981311 HAGH, HAGH.L, HAGHL coding downstream 24806 4978074 ~ 4981311 (-)
CI01000034_04951993_04959847 NA coding downstream 46270 4951530 ~ 4959847 (-)
CI01000034_04921458_04934523 E4F1 coding downstream 71594 4921169 ~ 4934523 (-)
CI01000034_05093584_05096564 NA coding upstream 85201 5093062 ~ 5096564 (-)
CI01000034_05147520_05150640 WFIKKN2, WFIKKN2A coding upstream 139145 5147006 ~ 5150640 (-)
CI01000034_05167889_05175190 ANKRD40 coding upstream 160028 5167889 ~ 5175312 (-)
CI01000034_05176199_05177220 NA coding upstream 168105 5175614 ~ 5177220 (-)
CI01000034_05189944_05197158 NA coding upstream 182023 5189884 ~ 5197531 (-)
G172609 NA non-coding downstream 19978 4984878 ~ 4986139 (-)
G172633 NA non-coding downstream 58025 4947881 ~ 4948092 (-)
G172627 NA non-coding downstream 160689 4843454 ~ 4845428 (-)
G172626 NA non-coding downstream 164621 4841265 ~ 4841496 (-)
G172643 NA non-coding upstream 44539 5052400 ~ 5052726 (-)
G172644 NA non-coding upstream 45265 5053126 ~ 5053360 (-)
G172645 NA non-coding upstream 45846 5053707 ~ 5054597 (-)
G172706 NA non-coding upstream 92420 5100281 ~ 5100485 (-)
G172714 NA non-coding upstream 144168 5152029 ~ 5152695 (-)
G172593 NA other downstream 11174 4992960 ~ 4994943 (-)
CI01000034_04216451_04218876 NA other downstream 788375 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 833947 4165373 ~ 4172272 (-)
G172151 NA other downstream 1608304 3391144 ~ 3451802 (-)
G172016 NA other downstream 1769502 3234963 ~ 3236615 (-)
G172800 NA other upstream 781171 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 789709 5795835 ~ 5811781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025219 si:ch211-139g16.8 coding NC_007114.7 CM002887.2 18389363 ~ 18396564 (+)