G171146


Basic Information

Item Value
gene id G171146
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 11750 ~ 12885 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU194427
CTGCCATTTCAACTACAATTCCACAGAGGCAGAAATAAGCTGCTAACCTAACTAAAACACTGGGTTTGTTAGGTTAACAAATCACACCAAAATTCTCCCTGATTATCTGTCACTGGCTAATATACATTATGCATTCAGTTTTGGAAGTATACATTTTTGCAAATCTCATTTCATACAATTTTAACATACAAAAAAATGGAAAAAAAGTGCTTACAAAATTTGTGCACAATAACATAGATAGACATATACTTAGACATAAAACAAAAGAAAACCAATACAAATATATGTCTTAAGGTAAGTTTTTAACATTAAATGTAAAACGTCATCAGTCGAACATGTAAACTCATTTACTCACTCGTCCACTTTTACAGCCTCATTGTGTTCATTATCACGATCTTGCAAGCTATTCTAACTCAAATTTTCAGGGGAAATGTTTTTGAAATAAAGACTGATAGAGTTGTCAGAAGCCTAATGGTGGTGACGTTGAAGTCATGTGACCGTGCTGTTGTTAATTTATAGCCTACATTTACTTTTTTACTTCTGTCCATTGTATTTATGCTTCCGAATAATACACTTTTCTTCAGAGCTTTTTTCTTCATTTTCCAGGTTGGCCTACAAAAATATGTCATCCCTGCAGCACAATACCTTAATTCTAAACTGGACTGGTAACCAGTAAAGAGGGGCCAGTGTAGATGAAATATGGTCCCTCTTAATAGTACCAGGCATAAATTGTCAGAGTAAATAAAACAAACAAACAAAACACATAAAAGTACCTGAGATTTCGGTGTGCTAACAGCCCAAAGCTGGAAGAAGTTACTTTTCACAACAGCATTAATCTGCTTGTCTGAACCAAAGGTAACCTTGGTGGGACCTTTAACAAATCCAGTATAGGGCTAAAAAAAATGACAATCTGTTTTCTCATGCAATTGTAAAACAGTTTAGACATTAATTTCATCAAGTTTGAATACTCCTGAAGTTACAGCTGAGCATTATCAGAATAACAGTGCCGTGCTTTTTTTTTTTACTTGTATATGAAGAAAATATTGTTTTCTATAATGCGATACTGGACTCGGTTTTCCATTTCCAGTGAAACAAATGGACCGGAGGTCTGGGTGTTTTGGGAAGGTCTTTTCCAG
>TU194430
CTGCCATTTCAACTACAATTCCACAGAGGCAGAAATAAGCTGCTAACCTAACTAAAACACTGGGTTTGTTAGGTTAACAAATCACACCAAAATTCTCCCTGATTATCTGTCACTGGCTAATATACATTATGCATTCAGTTTTGGAAGTATACATTTTTGCAAATCTCATTTCATACAATTTTAACATACAAAAAAATGGAAAAAAAGTGCTTACAAAATTTGTGCACAATAACATAGATAGACATATACTTAGACATAAAACAAAAGAAAACCAATACAAATATATGTCTTAAGGTAAGTTTTTAACATTAAATGTAAAACGTCATCAGTCGAACATGTAAACTCATTTACTCACTCGTCCACTTTTACAGCCTCATTGTGTTCATTATCACGATCTTGCAAGCTATTCTAACTCAAATTTTCAGGGGAAATGTTTTTGAAATAAAGACTGATAGAGTTGTCAGAAGCCTAATGGTGGTGACGTTGAAGTCATGTGACCGTGCTGTTGTTAATTTATAGCCTACATTTACTTTTTTACTTCTGTCCATTGTATTTATGCTTCCGAATAATACACTTTTCTTCAGAGCTTTTTTCTTCATTTTCCAGGTTGGCCTACAAAAATATGTCATCCCTGCAGCACAATACCTTAATTCTAAACTGGACTGGTAACCAGTAAAGAGGGGCCAGTGTAGATGAAATATGGTCCCTCTTAATAGTACCAGGCATAAATTGTCAGAGTAAATAAAACAAACAAACAAAACACATAAAAGTACCTGAGATTTCGGTGTGCTAACAGCCCAAAGCTGGAAGAAGTTACTTTTCACAACAGCATTAATCTGCTTGTCTGAACCAAAGGTAACCTTGGTGGGACCTTTAACAAATCCAGTATAGGGCTAAAAAAAATGACAATCTGTTTTCTCATGCAATTGTAAAACAGTTTAGACATTAATTTCATCAAGTTTGAATACTCCTGAAGTTACAGCTGAGCATTATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194427 False 1136 lncRNA 0.35 1 11750 12885
TU194430 True 995 lncRNA 0.34 1 11891 12885

Neighbor

gene id symbol gene type direction distance location
CI01000034_00051315_00059354 TOM1 coding upstream 37831 50716 ~ 59354 (-)
CI01000034_00071780_00082031 NA coding upstream 58659 71544 ~ 82031 (-)
CI01000034_00097095_00098729 MFSD6L coding upstream 84141 97026 ~ 99123 (-)
CI01000034_00101894_00115404 NA coding upstream 88167 101052 ~ 115404 (-)
CI01000034_00361018_00362033 MCHR1B coding upstream 348029 360914 ~ 362033 (-)
G171131 NA non-coding upstream 10305 23190 ~ 43248 (-)
G171136 NA non-coding upstream 30853 43738 ~ 44099 (-)
G171164 NA non-coding upstream 61366 74251 ~ 367683 (-)
G171177 NA non-coding upstream 156767 169652 ~ 187879 (-)
G171206 NA non-coding upstream 170139 183024 ~ 183365 (-)
G171229 NA other upstream 216519 229404 ~ 267246 (-)
CI01000034_00571856_00577732 NA other upstream 563603 571856 ~ 577775 (-)
CI01000034_01062505_01083413 NA other upstream 1058728 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 1298644 1311529 ~ 1312780 (-)
G171755 NA other upstream 1851233 1864118 ~ 1866373 (-)

Expression


Co-expression Network