G171131


Basic Information

Item Value
gene id G171131
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 23190 ~ 43248 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU194412
CCACATACAATACAAAAATAAAAAAAATAAAAAAATAAAAATCACAGTATTTATGCATTTTTTTGGATAAATAATATACTTATGTTTACTTATATTATGAAGTTGCTAAATATATTTAAGACATTACCTTAATCTAAAACTTATGTTAAGCACAAGTTAAACAAGCAAAAGAAGGCACAATCAAGCTTAAGTTTAAGCAAAGGATAAGTGCTAACAATATAGATCTAAAGCCATGAATCCAACACAAGGTCCTCCATTACACCAGCAAGAACCTTTAGAATAGGGTTCTCTCAATCCCACCTGAACTAGTTATGAATTTGATCAGTTAAGAAACCCTGCTTTAGGATAGACAGCATCCTGGACAAGCTGTAGGTGAAACTGTGTTAAATAGATGACAGATGTCAGACAGAGGCCAGATTTCAGTCAGCCACTATTCCTACTGCAAAAGTGCAAAAGTGTTTTATTAAAAAAAATAAATAAATAAAAAAAAAACACAATGAATGAATAAAAACCAAAATAAATAAAAGCTGAACGAGTTGTCCACTGTGACACTGTGAGCAACTGAGCATGCAGTATTGCTCATTTGTAGTGAGTGCAGACAGCTTTGTTGGTTTTAATGGAAGCAATTTAGTCAGTCACAAACTTCCAGTGTAGGCACTCCTTGAGAAATCAAAACACCTAGTCGTGTCCAACCCGCATGCCTTCTTTCAATACTTGCGTAATGTGCTAGTGATTGTTGCAACACTGAGGAAATCACATGCCTCTTGGAACTTGGGGTGTTTGGGGATTCCCTTAAAATCCCGCTGAAGGCAGGATTCAGAGCAAGACTGATATCTTCATAATCAAAAAGGCACAAAATGTCAAGAGCTCTTCATATCATCTACATGATTTTATCTCCACGTATTATAAATTACATTTCCAATCCTGAGACAGAATGTAAACGGTCATGCTCATGTGACGACCCTCTGCTTAAAGGGACAGTTCAGCCAAAATTCTGTCACATTCTCACCCTCATGTCATTACAAACCTGTATGACTTTCTTCTGTATATTTTGAGAAATGTAAATGTTTTTTGGTCCATACAGTGAGTCAGTGATAACCAAAATGGTAAAATATAGTTTTTTTATGCATGTTCCACACACACAACACACAAAAGGTAAATGACAGAATTTTCATTTTTGGGTGAATTATCCCTTTAAGAGATGAGCAATGTAGCCCAACAGTATTTGTTCTTATGATGATTAATGTGGATTATTCTGAATGGGAGAATGTGTGTCTGCAGGGAATAATTTACATAACATTTCCTCGATCTCTAGAGGTGCATTCTCACATGAGAGCACACAAACCAAATATCTGAGTGATCTCAGGTGGTGTAAATGCTTTCTAATTTGACTAAAAATACTAGTATGAACTTATGGATAAATCATGATTTCTGTGTGAAAGCATTCACACATCGATGTGTGCATAAGCTCATTAAAACTTAACACTTAAAACAACAGTACCTGTCTAAATCTTAAGGACACTTCACTGGTACAGTGCTTCATTATCTTCAAGTTGAGGGGCTGATGATCCAATGCCTGCTTCCACTGACCTAAACCAACTGTTTGGTGCACTAGATCAAACCCCTCTTGGCTCATACAAATGTTCTGGACATTCAAGGTGATCCAAAAGGGAACACTGTCTTTGTCACTTTGGCAAAAAGGAAGATCATGCTGTCCAGAGGTTTGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194412 True 1730 lncRNA 0.36 2 23190 43248

Neighbor

gene id symbol gene type direction distance location
CI01000034_00051315_00059354 TOM1 coding upstream 7468 50716 ~ 59354 (-)
CI01000034_00071780_00082031 NA coding upstream 28296 71544 ~ 82031 (-)
CI01000034_00097095_00098729 MFSD6L coding upstream 53778 97026 ~ 99123 (-)
CI01000034_00101894_00115404 NA coding upstream 57804 101052 ~ 115404 (-)
CI01000034_00361018_00362033 MCHR1B coding upstream 317666 360914 ~ 362033 (-)
G171146 NA non-coding downstream 10305 11750 ~ 12885 (-)
G171136 NA non-coding upstream 490 43738 ~ 44099 (-)
G171164 NA non-coding upstream 31003 74251 ~ 367683 (-)
G171177 NA non-coding upstream 126404 169652 ~ 187879 (-)
G171206 NA non-coding upstream 139776 183024 ~ 183365 (-)
G171272 NA non-coding upstream 247330 290578 ~ 335778 (-)
G171229 NA other upstream 186156 229404 ~ 267246 (-)
CI01000034_00571856_00577732 NA other upstream 533240 571856 ~ 577775 (-)
CI01000034_01062505_01083413 NA other upstream 1028365 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 1268281 1311529 ~ 1312780 (-)
G171755 NA other upstream 1820870 1864118 ~ 1866373 (-)

Expression


Co-expression Network