G169083


Basic Information

Item Value
gene id G169083
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 44301 ~ 44636 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192069
ATTGGCTCAATGGTGTTCAGTGTCTTTGGGAGGATTGCTGAGGCAGATTGGCAGCAAAGGCCATTAGGATTGTTTGTGATTTGGTCTTATAGTGATTTAGGAGTCCTCTTGACTACTCCTAACTTTTCACAGATTTAGGAGCTAGTTTTAGCACTAAAATACTTTGTGAAGTACTCTTAGAGCAAAAATTTAGGAGTCATAAAATAAGGACTGACATGCCCATTAATTTTATGAGTTTCTCCTAAATCGGCAAGTTACGAGCTACTTTTAGCCTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTAATTACTCACCCTCATGTTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192069 True 336 lncRNA 0.37 1 44301 44636

Neighbor

gene id symbol gene type direction distance location
CI01000034_00123919_00185433 NTN1B, NTN1.L, NTN1A, NTN1 coding downstream 79283 123919 ~ 185433 (+)
CI01000034_00229261_00311362 USP43B coding downstream 184625 229261 ~ 311958 (+)
CI01000034_00393749_00410314 GRB2A, GRB2B, GRB2, GRB2.S, GRB2.L coding downstream 349024 393660 ~ 410338 (+)
CI01000034_00422322_00453621 BPTF coding downstream 376839 421475 ~ 453644 (+)
CI01000034_00455762_00459788 KPNA2, IMA2 coding downstream 410509 455145 ~ 459927 (+)
G169064 NA non-coding upstream 1142 14185 ~ 43159 (+)
G169061 NA non-coding upstream 31418 12107 ~ 12883 (+)
G169087 NA non-coding downstream 21973 66609 ~ 71966 (+)
G169052 NA non-coding downstream 56413 101049 ~ 102040 (+)
G169117 NA non-coding downstream 151756 196392 ~ 196748 (+)
G169170 NA non-coding downstream 508299 552935 ~ 553203 (+)
G169172 NA non-coding downstream 510551 555187 ~ 556623 (+)
CI01000034_00643011_00645310 RBX1 other downstream 598361 642901 ~ 645310 (+)
G169309 NA other downstream 924625 969261 ~ 969921 (+)
G169357 NA other downstream 1058904 1053543 ~ 1119019 (+)
G169394 NA other downstream 1105661 1150297 ~ 1193560 (+)
G169340 NA other downstream 1205583 1250219 ~ 1310878 (+)

Expression


Co-expression Network