G171229



Basic Information


Item Value
gene id G171229
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 229404 ~ 267246 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU194534
AAATATTCATCTTATAAAGCATACTTGTATCTAAATCACAAACAAGTACCATGGTTTTCTTAGTATTGGTATTGGAGTACCATGCAAATACCATATATATGTATATAATCTTTCAGTATCATGGTATATATGAAAGTCCCATAGTATTACCATCTAACAATCACTGTAGCAGTGGGGGAGGGAAGGTGGTTTGGTCAGGTGATATATTTGCAGGCATGAGGTCTGTCTGTGTGATGCTGTGTGCACCTGTCACCTGATCAGGAGAGAGATTGCCCTCATCTGCCACCATCCTGCGCAGGCATGCCAAAGAGCCGAAGAGAGGCACAGCGAGCCCCACTCTCAGATACCGCTGCCCTTTACTGCTAAACACCAAAGTCACACACACTGGTCTCGTCTGCCTTAGAGGAATGGGAAGAGAAATGCACAGAAAAGGATCAAACGTGTTGCTCTGCTTAAGACAATGTGGGCATGTCAGAGATGACTTATATTGCGCCTGGAAGTGCTCCTGTACAAAGCTATGTTGTACACCAGGCTGCGTCTGTGGTGGGGTCGGGGTATCAGAGACAGGCTTTTCATCACGCCCTTCTTGACCCTTGCCGCTTGATTTGCTTCTGTTATTTCCATTGGGTATGGTTGAAGACGAGTTAATGTCCTCATGGAGGCGGTCCAGAAGCCAGAGCAGGAATTCCAAAGCGTCATGCTGGGAATTCCCCCGGAACTGTGCACCATATTTAGATACGGTCATCTTAAACTCAGCCGAGAGTTGAGGTGTATATTGAAAAGTCCAAAGCGCTCGGACCAAAGTCGCGAGCCGTTCCGTAACTTCTCCTCTCTCGTGCTGACCGTCCTCACTCCTTATAAATCCGTTCATTCCCCTGTGACACAGATCCAGTTTATATCGCTCCAAACCCAGATATTCTGCGAGCAGGTCCGTGTTGCTCAAGCACTGCACAACGGCGTTCATGAAGCAGGTGTTCCCGTGGTTCTTCAGACCCAACACGCCTGGCGTTTTATCCCCGTACAGCGAACACAGTCGCTCTTTCGCGGAGGAGCGGCAGGGAAGCGAGGAACTTTTCCTCACCTGGCTGCTGTCCTCTTTTTTCACATGTCCCGAGTTTCCAGCGCAAGGTGCGCTTTCTCCAAACCCACCATCATCATCCTCAGCATCCGACCGCTCGGTTGTTTCTCCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU194534 True 1190 TUCP 0.49 5 229404 267246

Neighbor


gene id symbol gene type direction distance location
CI01000034_00101894_00115404 NA coding downstream 114000 101052 ~ 115404 (-)
CI01000034_00097095_00098729 MFSD6L coding downstream 130281 97026 ~ 99123 (-)
CI01000034_00071780_00082031 NA coding downstream 147373 71544 ~ 82031 (-)
CI01000034_00051315_00059354 TOM1 coding downstream 170050 50716 ~ 59354 (-)
CI01000034_00361018_00362033 MCHR1B coding upstream 93668 360914 ~ 362033 (-)
CI01000034_00368808_00390623 NA coding upstream 101240 368486 ~ 391307 (-)
CI01000034_00558341_00561924 C1QTNF6A, C1QTNF6 coding upstream 290997 558243 ~ 561995 (-)
CI01000034_00571856_00577732 NA coding upstream 304610 571856 ~ 577775 (-)
CI01000034_00599073_00603301 UBE2I, GM14176, UBE2IA, GM5931, UBE2IB coding upstream 331827 599073 ~ 603301 (-)
G171177 NA non-coding downstream 41525 169652 ~ 187879 (-)
G171206 NA non-coding downstream 46039 183024 ~ 183365 (-)
G171136 NA non-coding downstream 185305 43738 ~ 44099 (-)
G171131 NA non-coding downstream 186156 23190 ~ 43248 (-)
G171146 NA non-coding downstream 216519 11750 ~ 12885 (-)
G171272 NA non-coding upstream 23332 290578 ~ 335778 (-)
G171324 NA non-coding upstream 79603 346849 ~ 351155 (-)
G171339 NA non-coding upstream 130468 397714 ~ 399839 (-)
G171340 NA non-coding upstream 144947 412193 ~ 412427 (-)
G171341 NA non-coding upstream 145426 412672 ~ 413037 (-)
CI01000034_01062505_01083413 NA other upstream 804367 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 1044283 1311529 ~ 1312780 (-)
G171755 NA other upstream 1596872 1864118 ~ 1866373 (-)
G171835 NA other upstream 2174575 2441821 ~ 2446293 (-)

Expression



Co-expression Network