G171324



Basic Information


Item Value
gene id G171324
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 346849 ~ 351155 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU194632
AGTGCATGGATAATGGGAAGATGGCCATCAGGTGTGCGTGCGATCAGTCCCAGGTAAGTGAGTGTGGGAATTGTAGTCCAAATGGAAACTAGTACTCGGGGGAGGGCTCCCTCTGGCGGCCCGGGAGATCTGGTGCAGGAGCTTGAATCGTAACAGTAATGTAATCCATTACATTACACATTTCAGGCAATATAATCTGACCACTTTTTGATTACTTTTGACCTAACCATATTGATATAAAAATAAGTAAGAAAGAAAATATATTCCATTCTTGATCATCAACAATATGAAGTGCATTAAATATTACATGACATCAGGGTTTCCCAGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU194632 True 329 lncRNA 0.41 2 346849 351155

Neighbor


gene id symbol gene type direction distance location
CI01000034_00101894_00115404 NA coding downstream 231445 101052 ~ 115404 (-)
CI01000034_00097095_00098729 MFSD6L coding downstream 247726 97026 ~ 99123 (-)
CI01000034_00071780_00082031 NA coding downstream 264818 71544 ~ 82031 (-)
CI01000034_00051315_00059354 TOM1 coding downstream 287495 50716 ~ 59354 (-)
CI01000034_00361018_00362033 MCHR1B coding upstream 9759 360914 ~ 362033 (-)
CI01000034_00368808_00390623 NA coding upstream 17331 368486 ~ 391307 (-)
CI01000034_00558341_00561924 C1QTNF6A, C1QTNF6 coding upstream 207088 558243 ~ 561995 (-)
CI01000034_00571856_00577732 NA coding upstream 220701 571856 ~ 577775 (-)
CI01000034_00599073_00603301 UBE2I, GM14176, UBE2IA, GM5931, UBE2IB coding upstream 247918 599073 ~ 603301 (-)
G171272 NA non-coding downstream 11071 290578 ~ 335778 (-)
G171177 NA non-coding downstream 158970 169652 ~ 187879 (-)
G171206 NA non-coding downstream 163484 183024 ~ 183365 (-)
G171136 NA non-coding downstream 302750 43738 ~ 44099 (-)
G171131 NA non-coding downstream 303601 23190 ~ 43248 (-)
G171339 NA non-coding upstream 46559 397714 ~ 399839 (-)
G171340 NA non-coding upstream 61038 412193 ~ 412427 (-)
G171341 NA non-coding upstream 61517 412672 ~ 413037 (-)
G171309 NA non-coding upstream 90132 441287 ~ 442256 (-)
G171356 NA non-coding upstream 114257 465412 ~ 468708 (-)
G171229 NA other downstream 79603 229404 ~ 267246 (-)
CI01000034_01062505_01083413 NA other upstream 720458 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 960374 1311529 ~ 1312780 (-)
G171755 NA other upstream 1512963 1864118 ~ 1866373 (-)
G171835 NA other upstream 2090666 2441821 ~ 2446293 (-)

Expression



Co-expression Network