G169366


Basic Information

Item Value
gene id G169366
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1072160 ~ 1073203 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192410
AAATACGTTCATAAAATGTAACAAATTCATACCATCCATACATCCAGACTACATAAATACATACCTTTATGAGTTCAAGTAGTTGCACTTGTTGAAAGCCGTTTGATGGCATGTAATAGATGCTAAACTTCCACTTCTTGTTATGCCTCTTTCCTCCAATCACCTCAAACTGACTGGGACTATACCACTTCCCTCTACATAAAATACAATTCTCTCCAATGTCATACTTTGTTCTGTGAAGACAACCTGCCATTTTCCCACAACGAACAGCCAGTTGTTTCTTATCTCTGACCTCTTGAAAAACCTCTCTTAGGTCTGGAAGGCTAGAGTTTTTACTTCTGAATTTTTTCTTCTTGTTACCATTTTTTTGATTCATCTTTCTTTTTTCCCTTTGTTTTCCTTTACTTTTTTCCATCTCGCTCAGCCAGTGAGATTCTGAATTCCCGCCCAAATCCAGCTCTGAATCTCTGAATAAATCCATGTCCAGTGGGTCTCTAAAACACAGCCATCATTTATTCGTGAATATTCAGAATTGGTTGTTAGTGGGTGGGATATATTAGGCAGCAAGTGAACATTTT

Function

NR:

description
PREDICTED: mixed lineage kinase domain-like protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192410 True 578 lncRNA 0.38 3 1072160 1073203

Neighbor

gene id symbol gene type direction distance location
CI01000034_00951238_00955839 NA coding upstream 116073 950467 ~ 956087 (+)
CI01000034_00943362_00945523 NA coding upstream 126529 943362 ~ 945631 (+)
CI01000034_00860887_00862727 NA coding upstream 209259 860887 ~ 862901 (+)
CI01000034_00821815_00825192 NA coding upstream 246955 820595 ~ 825205 (+)
CI01000034_00785411_00801907 NA coding upstream 270101 784545 ~ 803844 (+)
CI01000034_01124686_01125224 NA coding downstream 51483 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 66522 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 136957 1210160 ~ 1223869 (+)
CI01000034_01305634_01306636 NA coding downstream 232431 1305634 ~ 1306844 (+)
CI01000034_01383935_01395565 NA coding downstream 310388 1383591 ~ 1396448 (+)
G169300 NA non-coding upstream 9172 1062255 ~ 1062988 (+)
G169302 NA non-coding upstream 50336 993160 ~ 1021824 (+)
G169312 NA non-coding upstream 89951 979511 ~ 982209 (+)
G169308 NA non-coding upstream 106056 965853 ~ 966104 (+)
G169275 NA non-coding upstream 159873 912001 ~ 912287 (+)
G169368 NA non-coding downstream 1517 1074720 ~ 1075808 (+)
G169365 NA non-coding downstream 5132 1078335 ~ 1080864 (+)
G169351 NA non-coding downstream 9500 1082703 ~ 1083262 (+)
G169352 NA non-coding downstream 14216 1087419 ~ 1090273 (+)
G169309 NA other upstream 102239 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 425750 642901 ~ 645310 (+)
G169357 NA other downstream 30337 1053543 ~ 1119019 (+)
G169394 NA other downstream 77094 1150297 ~ 1193560 (+)
G169340 NA other downstream 177016 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 653307 1729413 ~ 1731179 (+)
G169806 NA other downstream 1244770 2317973 ~ 2337690 (+)

Expression


Co-expression Network