G169391


Basic Information

Item Value
gene id G169391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1127749 ~ 1132468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192440
AAACAATATGGCTGAACAAACAACTCCATTACAATAAAAATCAATTTCTTTACAGGTCAAGGAGAGAATGTGTCCTTAAATCATCCTCATCATGGAGGTTTGAGATAAACCGTCAACACATGTGGAGGAATTATGAGAGTCAGGATTCAGTGGGATAAACAGAATGATGCCGAGAACTCAGAGCAATCCTGATGGGGATTTTGAGAGGAAATCTTGATTCTCATCCCCTTCCTAAGCACAAGTCTTGAAGTGCTGGTTAAGTGGGATTACAGGGGAGGCCACAGGGGTCAGAATATCCAGTGTTTGCAGCAAATATTAGAGATTTAGGACCAACAATGTTGGAGCAAACCACAAAGCTGCAGAAAGCAGGACTAAGTGCTTGATCTCTGATGACAAATGGATTTTCAAAAGCAACAAAACCAAAAAGCTCTATCGAAACAGACCGAAAAAGCAATCCACAATAAAGACAATCCACGTTGGAGAACTGCAATTGTATGTAGCAACCTTATGTAAATTTAGGTTAATTAAGGTAATCTAGAATGGCGCTTTTGGTGATTCACTTTCGAGTCAATCAATCAAGTCTCAACTTTTAAATAAAGTATATAAAAGGCTTGTTGGACATTAAGAACAAGGCACGCCAAGAACGTAAGGGAAACTGCATTATGAGCTCATTTTATGACCCTAAGCAAAGCCCTAAACATTGTATTTGGCCACAGCAAAAGTTTCCATATCAATGACATCACCATCCACTTCATCAGGCCAGTGTGTTTCGCCTGTGCCTTTTCTCATTTAAAAACTGACACTGGCTTGCATCAAGACCGAAGCTCATGAGGTTTAAACTTCAGTTCTCATTAAAACCTAACTTGAGGGTAGAGACCGTTCCAACCACGTCAGGACTAGATCAAAAGCTGGCTTTTCCCAAAATGCCCTTTACCAAAGTCTAAGCAAACAGTCACAGACTACACACTCTCTCTGTTGAGATTTTTCCATCCCTGATCATAAATAGAGAGCTAAATGATCTTAAAGTGATTCCTAGCATTCCAAGTGAGAGCGAAAGATGACCTTATTGTCTTCATTTGAACTCAAAGCTTTTTGCAGTACTTAGAGCATTTAGAGTCTCTACTACAGAAGAACACTTCAGTGAGAAACAAAATAGCTGAACAAATGTCTTTAAAAAGGCAAAAATAAAACAACATTAACATGAATACACTAGTCATTAAATAATAGTTAAGGTTTCTTGAATGAGTCCATCAAATAACATCTAGATTTCAATACAATACTGCTCCCTTTTTGAAATTTTGAGCTAAATTAGAGGATAAATCTAGAAAAAGCATAGAAGGAACACATGGCTTTCTGGCTCAGATTTCTGTAGTTGAATCTCTGGCAATTATCTCTGCATTTCAGCTTAGCAACAACAAAACTTCCTATTCTTCATTCTCTTCTCTTGCCTGAGCTTTTCTTACTGTTTACTGAGAACCTCTGTGAAAGGTAATGTGGGTAAGACAGCACTATAAACACTCGTCAGGCATAAACACTGAGATAAAACATACAAATTTGGCATAGATGGTTGTTATTCTGCTTCATTATGAAGGTACTGGCTGTGGGGACCCTTAAAGCTGGAGGTGCCTGTGTCAGGAATCCTGCCACATGCCAAAGCCTAACTAAAAATAAAAATAACCAGGGTCCAAAATTAACTTTGTGCCACAATGAGAGGTGAACTGAGGAACTTTTATGGCCATAAATATTTTCATATAAGAAATATACTAGCAAAGAAATTTTATTTTGTTGCTATGACAATATATTTAGTTGTTTTTCTCTTGAATATTCGCAACCGTCACTGCAGGTAATCACACAAAAAATAATGTTTTTGTGTTTTAACGCCATGAAGGTCTCACCACTTTCATTGTCGTTATTAGGACAATATAAGAAAAACTCTGGTGAGGTTCAGACTACCGTTCTTACATTACACTTACATTTAAAATATGTATTATGTTGCTATTAACAAATTATCGGACAACTGGTTACTTACTCTCCAAAGTGAATTCTTATTCATATTTTGATCAATTTGGACTCTGAAAATATCCTTAGAATATAATATATAACTAAAAAGGTCTTAAAATTGAGCCCTCAATTGCGGTTTACAGTACATTTCAATGTTTTTGATGCTATACAGAATACATTCGCTCACAGAAATGATCGAAAATGCTGCAGTTTGAGTTTGAAGATACAATACTGTGTGTAAAACATTCAAAAGTTTGGGATCAGTAGGATTTGTAAAAGAAATTAATACTTTTATTCAACAAGGATGCATTAAATTGATTAAAAGTGACTTTTAAGTTGTAACAAAATAAATACATTTCAAATAAATGCTGTTCTTTTGAACTTTCTATTCATCAAAGAATCTTGAAAAAAGTTTCTTCACAGTTTTTACAAAAATATTAAGCAGCACAACTGTTTTCAATATTGATAATAAGAAATGTTTCTTGATCAAATCATCATATCAGAACGACTTTTGAAGGATCATGTGACACTGAAGACTGGCGTAATGATGCTGAAAATTCAGCTTTGACATCACAGGAATAAATTACATTTTATTTATATTTAAATAGAAAACCGTTGTAATAATATTTCTCAATATCACTTTTTTTTACTATATATTGTATAAGAGACTTGTTTCAAAAACATTTATAAATCTTACAAACCCCAAACTTTTGAATGGTAGCATGCATGTATGTATATACACACATACAGTTATGATATATGGAATAAATATCATAAAGTAAATTGCTTGGAAGAAGCCATTGGTGAGTAAATCTTTTCTCATTGGTAAGAAAAGTTGATGTATTCAGATTAAACACAGTGAGCCAAAAAACCTTCACCCAAGACATTCTTTCATGGTTATAAAAGTCATGGCACAGTGTTGTAGAGTGGACAGCTTGGCCATATCTCTTAACAAAGGCTCGCATGAGCATCAGGCAGCTGAAACTGTAAACAATCTACTAACAAACCTCCTAACATCCCTTTTTGAAGGCTAGAGGAGGCTGTATCTGTGGTGTCTGCACTCATGTTTTGTTAGGGGGATGCTTTGGCTGTTGTGTGTCATTTTGAGCCGATTTATTTTTGGGGTAGCAGGGAGGAGAGGTAGCGGACGGTGGATGACAGAACTCCTTGATGGTTACGGTGAGGAGGTTAGCTGTGATATCCGTAACGACCACATTGGCACATCGTGATGTCATGTCAGGATGCCAGTCCAAATCTTCCTCTTCCTCCGATGGCTCCTCTGACACAGGAACCTCTGGGACCTTGAGCGGCCGACGGCCAGAGAAGGGATGCCGTCTCCGCAATCGCCTGTCCATTTCATGAGGTACGGAAAGGTCTAGGATGTGTTCGTTGTCTTCTGAGGATGACGACGCTGAGGAGGAAGAGGAAAACATAGGAGAGGATGGAAGAGCAGAAGGACCCGAGCTGTTTTTGGATGCCACGGGTTGAGCGCCCACTTTGTGAAGGGCAGGATCTTGGGCGTTTGTTGCAGAGGTCTTGGGTGGCAATGAGGAATGCTGGGATTGGGTTTGTCGCGGAGAGGGTGGCTCACCATCCGAAACTTCCGAGCTTGAGTTTGATGGAGGCAGTTCATCATTGAGAGTCTGACCTTTGGAAACGTCCAGGACCTTTGAACTTTTGGAGGAAGAGAGATTGTTTGTGTTGTTGCGACTCTCTCCGCTTTGAGTCTGGTTCTCTGCATTGTTCAGAGAGTGAGAATCGAAGAGTTTTCCGAAAACTGGAAACCCAGAACTTCTAATTGGGGACTGGATTCCTCGGTAGGAGACTTCTCCAAACCGCCTGTTTTTACCAATCACTCTATTCCGGGATGGAATTTTCTGCCGCCCAAAATGGGACTGCTGGGCAGCGGGCATGTGTGTCCTTCTACTATTAGCAACTCCGCCATTCCCAGCCTTGTCAACCACTTTGAGGTTCAGAATAACCCGTCCCTTCTTCACTTCCCTGGGTTTGACTTTTCGATTGAGAATACGGACCGTTTCCGAAAACGGACTGACTGTCGGACGGGACGAAAAAGGACCAGAGGGACCGACTGTTTGGTCAGGGCGGGGCAAGGGGCGACGTGCCATGCGATGGCAGCGGTGAATGTCTTTTTTCAGTTTGGGCTGAGCAGCGCCCGACTGCAGTTTAGCATTAGATGGGGCAGTTGGGGTGTAGGACGGTGCAGCTGAGGGTGGAGGAGGCTTGGAATGTGGCTGAGGACGACTATGCTTGAACTCCGGGACT
>TU192441
GTTTGAGTTTGAAGATACAATACTGTGTGTAAAACATTCAAAAGTTTGGGATCAGTAGGATTTGTAAAAGAAATTAATACTTTTATTCAACAAGGATGCATTAAATTGATTAAAAGTGACTTTTAAGTTGTAACAAAATAAATACATTTCAAATAAATGCTGTTCTTTTGAACTTTCTATTCATCAAAGAATCTTGAAAAAAGTTTCTTCACAGTTTTTACAAAAATATTAAGCAGCACAACTGTTTTCAATATTGATAATAAGAAATGTTTCTTGATCAAATCATCATATCAGAACGACTTTTGAAGGATCATGTGACACTGAAGACTGGCGTAATGATGCTGAAAATTCAGCTTTGACATCACAGGAATAAATTACATTTTATTTATATTTAAATAGAAAACCGTTGTAATAATATTTCTCAATATCACTTTTTTTTACTATATATTGTATAAGAGACTTGTTTCAAAAACATTTATAAATCTTACAAACCCCAAACTTTTGAATGGTAGCATGCATGTATGTATATACACACATACAGTTATGATATATGGAATAAATATCATAAAGTAAATTGCTTGGAAGAAGCCATTGGTGAGTAAATCTTTTCTCATTGGTAAGAAAAGTTGATGTATTCAGATTAAACACAGTGAGCCAAAAAACCTTCACCCAAGACATTCTTTCATGGTTATAAAAGTCATGGCACAGTGTTGTAGAGTGGACAGCTTGGCCATATCTCTTAACAAAGGCTCGCATGAGCATCAGGCAGCTGAAACTGTAAACAATCTACTAACAAACCTCCTAACATCCCTTTTTGAAGGCTAGAGGAGGCTGTATCTGTGGTGTCTGCACTCATGTTTTGTTAGGGGGATGCTTTGGCTGTTGTGTGTCATTTTGAGCCGATTTATTTTTGGGGTAGCAGGGAGGAGAGGTAGCGGACGGTGGATGACAGAACTCCTTGATGGTTACGGTGAGGAGGTTAGCTGTGATATCCGTAACGACCACATTGGCACATCGTGATGTCATGTCAGGATGCCAGTCCAAATCTTCCTCTTCCTCCGATGGCTCCTCTGACACAGGAACCTCTGGGACCTTGAGCGGCCGACGGCCAGAGAAGGGATGCCGTCTCCGCAATCGCCTGTCCATTTCATGAGGTACGGAAAGGTCTAGGATGTGTTCGTTGTCTTCTGAGGATGACGACGCTGAGGAGGAAGAGGAAAACATAGGAGAGGATGGAAGAGCAGAAGGACCCGAGCTGTTTTTGGATGCCACGGGTTGAGCGCCCACTTTGTGAAGGGCAGGATCTTGGGCGTTTGTTGCAGAGGTCTTGGGTGGCAATGAGGAATGCTGGGATTGGGTTTGTCGCGGAGAGGGTGGCTCACCATCCGAAACTTCCGAGCTTGAGTTTGATGGAGGCAGTTCATCATTGAGAGTCTGACCTTTGGAAACGTCCAGGACCTTTGAACTTTTGGAGGAAGAGAGATTGTTTGTGTTGTTGCGACTCTCTCCGCTTTGAGTCTGGTTCTCTGCATTGTTCAGAGAGTGAGAATCGAAGAGTTTTCCGAAAACTGGAAACCCAGAACTTCTAATTGGGGACTGGATTCCTCGGTAGGAGACTTCTCCAAACCGCCTGTTTTTACCAATCACTCTATTCCGGGATGGAATTTTCTGCCGCCCAAAATGGGACTGCTGGGCAGCGGGCATGTGTGTCCTTCTACTATTAGCAACTCCGCCATTCCCAGCCTTGTCAACCACTTTGAGGTTCAGAATAACCCGTCCCTTCTTCACTTCCCTGGGTTTGACTTTTCGATTGAGAATACGGACCGTTTCCGAAAACGGACTGACTGTCGGACGGGACGAAAAAGGACCAGAGGGACCGACTGTTTGGTCAGGGCGGGGCAAGGGGCGACGTGCCATGCGATGGCAGCGGTGAATGTCTTTTTTCAGTTTGGGCTGAGCAGCGCCCGACTGCAGTTTAGCATTAGATGGGGCAGTTGGGGTGTAGGACGGTGCAGCTGAGGGTGGAGGAGGCTTGGAATGTGGCTGAGGACGACTATGCTTGAACTCCGGGACTCTTGGGGAAGTCTCTGCAGCCTGCGCTCTTGACTAAATAATTGGGAAAAAGTCAAAAATTATTCACTTTTAAAAGAGTTAGTTAACTCAAAAATGAAAATCTTGTCACCATTAACTCACCCTGATGTCAATGCAAACCAATAAGACTTTCAACCTGAGAGATTTCTGTCCCAACCAATGAGCTTGTTCTCACATGTAACACCGTGTCCTAACCAGACGCGACGCGGCGCCACGACACGCGATAAAAGGTATCTTTTCCATGTTAATCTGAGTTTTTGTCCTAACCAGCCGCGACACGCGACGATTCTATTTTAGAAACAGTTTCTATTTCTCTGCGACGTCGCGGCTGGAACAGCAACACAAAGTATGGCAATGATAACATCAGGTACTGTTTATGTGCTTTATTTAATGTTAAAAGGGTCTAATGTGAGTTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192440 False 4284 lncRNA 0.40 1 1127749 1132032
TU192441 True 2510 lncRNA 0.43 1 1129959 1132468

Neighbor

gene id symbol gene type direction distance location
CI01000034_01124686_01125224 NA coding upstream 1552 1124686 ~ 1126197 (+)
CI01000034_00951238_00955839 NA coding upstream 171662 950467 ~ 956087 (+)
CI01000034_00943362_00945523 NA coding upstream 182118 943362 ~ 945631 (+)
CI01000034_00860887_00862727 NA coding upstream 264848 860887 ~ 862901 (+)
CI01000034_00821815_00825192 NA coding upstream 302544 820595 ~ 825205 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 7257 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 77692 1210160 ~ 1223869 (+)
CI01000034_01305634_01306636 NA coding downstream 173166 1305634 ~ 1306844 (+)
CI01000034_01383935_01395565 NA coding downstream 251123 1383591 ~ 1396448 (+)
CI01000034_01632580_01633233 NA coding downstream 499534 1632002 ~ 1633525 (+)
G169392 NA non-coding upstream 105 1126456 ~ 1127644 (+)
G169352 NA non-coding upstream 37476 1087419 ~ 1090273 (+)
G169351 NA non-coding upstream 44487 1082703 ~ 1083262 (+)
G169365 NA non-coding upstream 46885 1078335 ~ 1080864 (+)
G169417 NA non-coding downstream 100419 1232887 ~ 1233089 (+)
G169422 NA non-coding downstream 115679 1248147 ~ 1248372 (+)
G169435 NA non-coding downstream 161701 1294169 ~ 1302067 (+)
G169434 NA non-coding downstream 163123 1295591 ~ 1296004 (+)
G169456 NA non-coding downstream 220690 1353158 ~ 1353446 (+)
G169357 NA other upstream 8730 1053543 ~ 1119019 (+)
G169309 NA other upstream 157828 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 481339 642901 ~ 645310 (+)
G169394 NA other downstream 17829 1150297 ~ 1193560 (+)
G169340 NA other downstream 117751 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 594042 1729413 ~ 1731179 (+)
G169806 NA other downstream 1185505 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 2301668 3432846 ~ 3438839 (+)

Expression


Co-expression Network