G171631


Basic Information

Item Value
gene id G171631
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1400324 ~ 1401912 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU194972
GTAATAGTAAACAAATGCACTGTAAAATAAATGAAATTATATTCATTATAATTTTATATAAATGAAAATAAATATTTCATAAGTATATTATTTTACTTTACCCTACAGTAGGGAAATTACAATACTTTTGTTCTAATGTCTACACTTGCAAGAGAGAAACCCTTTTAGCCCTTTTAAAAATTGCATTTTAGCGGAAAACTGCAGTTTCTGTGAAAACGGGTTTAAAAAGGAGTCTCATTACAAATCTAGTGAAGTGCTGTAATCTTCCCACAAAAATGCTGGAAATAATGCAAATGTCGATACCCAGATGCACGTTAGCACATGCAGAAATGGCGTTTACTGCATTCATTCACTGTGAACCAAGTCGTTCTGAGACACATTTCCTCAACAACCGTCCATACCGGCGTGATGAATACGATCCTCAATTGGATGGAACTAAAATAAATACTTTTAATGTTGCGATCCTATTGGACTTATGATAGCAACCTGAATTGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCACCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTTAACACCAATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTCTGGCTTGCTTAGTTGGGGACACTTGACTTGACATTTGATATTCAACAGTGCTTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCCAAACAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCGCTATATAAATAAAGGTGACTTGACTTGACTTGACATAAAATAAAATGTGCACTTTGCTTTAAAAATGTGAAGCCAAAACAGATGATATACTTGTTTATTTAAATCAGTCTTTTGCGATTTGATAAGGGAAAACAACCAACAAAAAAGGGAAAACAAAAGCAAAACAACGTTAGAGGTATTTTATGTTATTATGAGAAGTTGTAAAATATTTTCGGTTCATTATGATGCTGTGGTGGCACAGAATAGACTATGGCGGACCTAGGTAGTTCTGGGTAATTCATGGTAAACACTGCATATGCATAATTTTTATGTTTTATGTTTGATGCACATTGTCTTTTTTACATCTTACTTTACATAAAACTGCACACATACATTTATGCATTTGCCTGGTGCTTTTAGCTGTTTTTTCAACTTCAGGAACTTATGTCCAAGAGTTGTTTTTTGGGTCACATTTAAGAGCTTGTAAGTCTTGCAGATGTTTTTATTATACATTCATCATTTGTGTTTCTTTTCAAATACCTTTTTTAGACGTGATGCATGGAAAAAAAGATATTTATGAAAAATATTTTTGTACATCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194972 True 1384 lncRNA 0.35 2 1400324 1401912

Neighbor

gene id symbol gene type direction distance location
CI01000034_01323481_01381800 COPZ2 coding downstream 16852 1323378 ~ 1383472 (-)
CI01000034_01312431_01312780 PRR15LA coding downstream 87544 1311529 ~ 1312780 (-)
CI01000034_01308438_01309828 ATF4B coding downstream 89445 1308319 ~ 1310879 (-)
CI01000034_01294226_01301994 ADSL coding downstream 98330 1294176 ~ 1301994 (-)
CI01000034_01286141_01289408 NA coding downstream 110916 1285074 ~ 1289408 (-)
CI01000034_01498024_01498299 NA coding upstream 95168 1497080 ~ 1499836 (-)
CI01000034_01603228_01604932 HOXB1A coding upstream 200522 1602434 ~ 1605430 (-)
CI01000034_01621979_01623991 HOXB2, HOXB2A coding upstream 219877 1621789 ~ 1624069 (-)
CI01000034_01625293_01629938 HOXB3AA, HOXB3A, HOXB3 coding upstream 222788 1624700 ~ 1631372 (-)
CI01000034_01648924_01649935 NA coding upstream 246986 1648898 ~ 1650403 (-)
G171582 NA non-coding downstream 151971 1248143 ~ 1248353 (-)
G171572 NA non-coding downstream 202054 1197978 ~ 1198270 (-)
G171405 NA non-coding downstream 272681 1126485 ~ 1127643 (-)
G171549 NA non-coding downstream 277605 1122417 ~ 1122719 (-)
G171404 NA non-coding downstream 319328 1078362 ~ 1080996 (-)
G171704 NA non-coding upstream 308766 1710678 ~ 1710957 (-)
G171712 NA non-coding upstream 338732 1740644 ~ 1741140 (-)
G171724 NA non-coding upstream 362589 1764501 ~ 1768078 (-)
G171731 NA non-coding upstream 378934 1780846 ~ 1781056 (-)
G171751 NA non-coding upstream 425684 1827596 ~ 1830627 (-)
CI01000034_01062505_01083413 NA other downstream 323102 1062444 ~ 1083413 (-)
CI01000034_00571856_00577732 NA other downstream 816041 571856 ~ 577775 (-)
G171229 NA other downstream 1133078 229404 ~ 267246 (-)
G171755 NA other upstream 462206 1864118 ~ 1866373 (-)
G171835 NA other upstream 1039909 2441821 ~ 2446293 (-)
CI01000034_02510595_02511512 NA other upstream 1107901 2510061 ~ 2511521 (-)
G172016 NA other upstream 1833051 3234963 ~ 3236615 (-)
G172151 NA other upstream 1989601 3391144 ~ 3451802 (-)

Expression


Co-expression Network