G171755


Basic Information

Item Value
gene id G171755
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1864118 ~ 1866373 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU195117
ATTCATTATGCGCGGTTTCGTTTCTGTGAAGTGTGAACCCACGGGCTGGGATAACCTGGTGATAACAATCACAATACAGCTCTGACTAAGCCTAAAACCATGTTTTATCAGTGTTCCATTCATTATGAAATATTTATTCATTCATTCCACTTTTTTAGAGAACTCACACACAATCAACAAAAATGCAGCATTTACAGTTTTGATATTTTACGGCAGCTCTTAATGTGTTAGGATAAGCTTTGATGGTGAACACTGAAGTGTTACATTCAGCACCATGATCATGAGTGTGTGGTTGGGAGAGCTTGTTTCTCAGACATTACAGAGCAAAACACATTTTCTCATGGACACCAAGCAGGGGCTTTTAGGGAGATCCAAAAAAAAAAAAAAAAATCACCCTTCAATCTGCTTAAGAAGATCCAAAGTGCAATCTATGTGAGTATGAGAGATGAGACCACAAGGGTAGATTTTGCTTCAGCGCACAGGACGGTATGAACGAAGTTGCTTCCTTGTGACGGTTTCATTTGCGACATGTCCGATGAGGCGTCCGTTTCTTGGTTACCTCTGCTCGGCATCGACTACGCTCATCCAACCATGGTTGGGAAGAGGTCTTCCAAAAGCCACCACTGGCAAAAAGGGTGTCACCATAATAGACTCCACTGAGGAAATACACAGAAATGAGAACATTAAAAGAACGGACCAAATACTTTCAATGCACATGGGGGAAAAATCCATCTGCTGACATACCATCTTCAGGGTCTGGATAGAAGGAGAGCAGCTCTGGTTCGCTTTCCTGAATGACCTTCCTCCTGTTCATCCTCTGCTGCAGGCGCTGAAACATTCTCTGCTCCCGAATACGTTGGATATCCCACCTGAAAAAGAGAAATGAGATTAAAGGATAAATAGATTCACAATGCTCTCATCTACTCGACGCTATACAGAAAAACAAAAAACAAGCATCACCTCTTCCTCCTCTTCTCATCCAGTTCAAGCTTTGAATGTCTCTTCAGAAAGACGTTATCATCCAGACACTGCACAAAAGAAAGTATTTAGATGGATTACTAGGGCTGAACGATTAATCAAAATAACACTGAAATCACAATATGGCTTAGTGCTCTTATCAGTTTGCAAAGGCTGCACTGTAATGAAATACATATGTGAGCTAGCAGTTCATGATATGGTGTTTTCAGAATCTCACAGCGGATCGGTTCGCAGTAAATGCAGCCCCACAAATTCCATTTTCATCTGCTCTGAGTTTGGGTTGCTTATAACGTGCATTTGGGAACAATTCCACACACCATCTTTTCAAACTTGTAATGAGTAGTGCTTATAAACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195117 True 1335 TUCP 0.41 3 1864118 1866373

Neighbor

gene id symbol gene type direction distance location
CI01000034_01842093_01847705 NR1D1 coding downstream 16413 1840937 ~ 1847705 (-)
CI01000034_01785791_01788743 NA coding downstream 74303 1785235 ~ 1789815 (-)
CI01000034_01718736_01720031 HOXB13, HOXB13AB, HOXB13A, HOXB13AA coding downstream 143872 1718606 ~ 1720246 (-)
CI01000034_01703545_01705527 HOXB10A, HOXD10A, HOXA10 coding downstream 158075 1702892 ~ 1706043 (-)
CI01000034_01694301_01697568 HOXB9, HOXB9AB, HOXB9A coding downstream 165691 1694041 ~ 1698427 (-)
CI01000034_01957876_01995623 NA coding upstream 91503 1957876 ~ 1995816 (-)
CI01000034_02010544_02026521 NA coding upstream 143769 2010142 ~ 2026725 (-)
CI01000034_02092229_02092596 GNGT2, GNGT2A coding upstream 225586 2091959 ~ 2092642 (-)
CI01000034_02098976_02103261 NA coding upstream 231230 2097603 ~ 2103261 (-)
CI01000034_02110958_02136112 NA coding upstream 244573 2110946 ~ 2136112 (-)
G171759 NA non-coding downstream 3027 1860582 ~ 1861091 (-)
G171785 NA non-coding downstream 8667 1854033 ~ 1855451 (-)
G171751 NA non-coding downstream 33491 1827596 ~ 1830627 (-)
G171731 NA non-coding downstream 83062 1780846 ~ 1781056 (-)
G171724 NA non-coding downstream 96040 1764501 ~ 1768078 (-)
G171743 NA non-coding upstream 83769 1950142 ~ 1952366 (-)
G171748 NA non-coding upstream 86085 1952458 ~ 1952778 (-)
G171745 NA non-coding upstream 86537 1952910 ~ 1953364 (-)
G171815 NA non-coding upstream 93081 1959454 ~ 1961649 (-)
G171860 NA non-coding upstream 208323 2074696 ~ 2074906 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 545864 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 786896 1062444 ~ 1083413 (-)
CI01000034_00571856_00577732 NA other downstream 1279835 571856 ~ 577775 (-)
G171229 NA other downstream 1596872 229404 ~ 267246 (-)
G171835 NA other upstream 575448 2441821 ~ 2446293 (-)
CI01000034_02510595_02511512 NA other upstream 643440 2510061 ~ 2511521 (-)
G172016 NA other upstream 1368590 3234963 ~ 3236615 (-)
G172151 NA other upstream 1525140 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 2300126 4165373 ~ 4172272 (-)

Expression


Co-expression Network