Gene
RNA
| Item | Value |
|---|---|
| gene id | G171815 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 1959454 ~ 1961649 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195182 | True | 2076 | lncRNA | 0.38 | 2 | 1959454 | 1961649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_01842093_01847705 | NR1D1 | coding | downstream | 111749 | 1840937 ~ 1847705 (-) |
| CI01000034_01785791_01788743 | NA | coding | downstream | 169639 | 1785235 ~ 1789815 (-) |
| CI01000034_01718736_01720031 | HOXB13, HOXB13AB, HOXB13A, HOXB13AA | coding | downstream | 239208 | 1718606 ~ 1720246 (-) |
| CI01000034_01703545_01705527 | HOXB10A, HOXD10A, HOXA10 | coding | downstream | 253411 | 1702892 ~ 1706043 (-) |
| CI01000034_01694301_01697568 | HOXB9, HOXB9AB, HOXB9A | coding | downstream | 261027 | 1694041 ~ 1698427 (-) |
| CI01000034_02010544_02026521 | NA | coding | upstream | 48493 | 2010142 ~ 2026725 (-) |
| CI01000034_02092229_02092596 | GNGT2, GNGT2A | coding | upstream | 130310 | 2091959 ~ 2092642 (-) |
| CI01000034_02098976_02103261 | NA | coding | upstream | 135954 | 2097603 ~ 2103261 (-) |
| CI01000034_02110958_02136112 | NA | coding | upstream | 149297 | 2110946 ~ 2136112 (-) |
| CI01000034_02154099_02162106 | NAGS | coding | upstream | 190946 | 2152595 ~ 2162106 (-) |
| G171745 | NA | non-coding | downstream | 6090 | 1952910 ~ 1953364 (-) |
| G171748 | NA | non-coding | downstream | 6676 | 1952458 ~ 1952778 (-) |
| G171743 | NA | non-coding | downstream | 7088 | 1950142 ~ 1952366 (-) |
| G171759 | NA | non-coding | downstream | 98363 | 1860582 ~ 1861091 (-) |
| G171785 | NA | non-coding | downstream | 104003 | 1854033 ~ 1855451 (-) |
| G171860 | NA | non-coding | upstream | 113047 | 2074696 ~ 2074906 (-) |
| G171867 | NA | non-coding | upstream | 134201 | 2095850 ~ 2096308 (-) |
| G171849 | NA | non-coding | upstream | 201618 | 2163267 ~ 2165434 (-) |
| G171841 | NA | non-coding | upstream | 441444 | 2403093 ~ 2428544 (-) |
| G171890 | NA | non-coding | upstream | 581514 | 2543163 ~ 2543769 (-) |
| G171755 | NA | other | downstream | 93081 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 641200 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 882232 | 1062444 ~ 1083413 (-) |
| CI01000034_00571856_00577732 | NA | other | downstream | 1375171 | 571856 ~ 577775 (-) |
| G171229 | NA | other | downstream | 1692208 | 229404 ~ 267246 (-) |
| G171835 | NA | other | upstream | 480172 | 2441821 ~ 2446293 (-) |
| CI01000034_02510595_02511512 | NA | other | upstream | 548164 | 2510061 ~ 2511521 (-) |
| G172016 | NA | other | upstream | 1273314 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 1429864 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 2204850 | 4165373 ~ 4172272 (-) |
