G169760


Basic Information

Item Value
gene id G169760
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2235008 ~ 2304098 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192868
GTGACTGCTGCCATGTTAGGAAAATGTATTTTAAGTATGCTTAATTTTAACTATGCTCAAATTTTAAAAAATCTTACCCCCAGTTTCACAGACAAGCCTAGTCCCAGACTAAAATGCATTTTTGAGCTGTTTTAACTAAAAGCAACTTGCACTGACATATTTAAGATATTGTTTGTCTCAAGACACACCAGTAATGTTTTTTTCTAAGGGGACAGTTCACCCAAAAATTGAAAATTATCTCATGATTTACTCACCCTCAAGCCATCCCAGGTGTACATGACTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192868 True 285 lncRNA 0.35 2 2235008 2304098

Neighbor

gene id symbol gene type direction distance location
CI01000034_02231423_02231755 NA coding upstream 2884 2231303 ~ 2232124 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 287821 1900645 ~ 1947187 (+)
CI01000034_01872601_01880795 CASC3 coding upstream 354213 1872601 ~ 1880795 (+)
CI01000034_01862099_01867869 NA coding upstream 367139 1862099 ~ 1867869 (+)
CI01000034_01858418_01860499 NA coding upstream 373923 1858418 ~ 1861085 (+)
CI01000034_02421189_02423360 NA coding downstream 116928 2421026 ~ 2423527 (+)
CI01000034_02550332_02552258 NA coding downstream 246234 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 258840 2562938 ~ 2564172 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 358111 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 383847 2687945 ~ 2705564 (+)
G169686 NA non-coding upstream 52863 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 68082 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 121676 2109522 ~ 2113332 (+)
G169698 NA non-coding upstream 140391 2091899 ~ 2094617 (+)
G169696 NA non-coding upstream 144360 2090405 ~ 2090648 (+)
G169906 NA non-coding downstream 172178 2476276 ~ 2477466 (+)
G169922 NA non-coding downstream 202547 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 205681 2509779 ~ 2510694 (+)
G169927 NA non-coding downstream 244536 2548634 ~ 2588029 (+)
G169946 NA non-coding downstream 284842 2588940 ~ 2589235 (+)
CI01000034_01729413_01730790 EVE1 other upstream 503831 1729413 ~ 1731179 (+)
G169340 NA other upstream 924130 1250219 ~ 1310878 (+)
G169394 NA other upstream 1041448 1150297 ~ 1193560 (+)
G169357 NA other upstream 1115989 1053543 ~ 1119019 (+)
G169309 NA other upstream 1265087 969261 ~ 969921 (+)
G169806 NA other downstream 13875 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1130038 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1821002 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1890540 4192311 ~ 4200636 (+)

Expression


Co-expression Network