G169806


Basic Information

Item Value
gene id G169806
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2317973 ~ 2337690 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192920
CCCAGCATCACTAGGCCAAAAAGTCACTTGAGTTATTTTTAAAAGAATAATGATAGAGACTGGATAGAGCATCAAATGCATGTATCAAACCTGGGGGTCATCTTGTTCCTCCATGTTGTACTGTGCTCCACCAGGCCCTTCGTTCACTTTGTCCCCGAGCAGGAACCCCAGTCGCGTCATCAGTGTGTTGGCGGCCTCGTCTACAGATGGAGGAGGACCCAGTTCTTGGCTTTCATCCCCTGGCAGTCTCTTTAGCGGCTGTAGACGCATGTTGAGGGCCTGGTGGGACAGCAGGGGTGAGGAGGGGAGAGAGCGCGACACACCCTCCATGATCCGAATGTGCTGCATGCCCTCGGTCACTGGGAGAGGAGGGACAGCGTAATCCCCCTCGAACACACACTCGCCTTCCACAGAGTCACTGCCTGGAGAGTGAGACAGAGATCACAAATCAATTCCAGAATGAATTACACATTCTTTACGTTAGCAAGATACGTTCAAGTGACCAATCAAATGAGCCTATTAGATGTAAAGACTCATTTGCATGTCAGAGGCACAAACGCACACAGTTAGTCAGTTCAGCTTATTAACACTCCGCTATCAGTGTTCCTGAAGAGACGACACCTCCAGAATTAGAAACCGAAAGAAAGAGAGAGGGAGACATTGAACATGTTGTCAAACGCCTGTAGCTGTTATATTTGTGTGTATGGACATATTGTGCCTTACACACAAACACTGATATACCTTTACAGTTTCGACTGCACACTAGTTTGCTTAGCAAGATTTAGTTCAAAGTGAACTCTGCCATGACAGTAGAAAATCAACCAGAAAAGACATGTTTGCTAATACTAGTACAGTATGTAGGTTTGCCTGTTGTTCAGAACAACAAGGTACAATGTGAAAATCAGACTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192920 True 912 TUCP 0.46 2 2317973 2337690

Neighbor

gene id symbol gene type direction distance location
CI01000034_02275470_02281951 CYB561 coding upstream 35369 2274601 ~ 2282604 (+)
CI01000034_02256162_02260170 NA coding upstream 57509 2255765 ~ 2260464 (+)
CI01000034_02231423_02231755 NA coding upstream 85849 2231303 ~ 2232124 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 370786 1900645 ~ 1947187 (+)
CI01000034_01872601_01880795 CASC3 coding upstream 437178 1872601 ~ 1880795 (+)
CI01000034_02421189_02423360 NA coding downstream 83336 2421026 ~ 2423527 (+)
CI01000034_02550332_02552258 NA coding downstream 212642 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 225248 2562938 ~ 2564172 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 324519 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 350255 2687945 ~ 2705564 (+)
G169760 NA non-coding upstream 13875 2235008 ~ 2304098 (+)
G169768 NA non-coding upstream 58169 2243834 ~ 2259804 (+)
G169686 NA non-coding upstream 135828 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 151047 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 204641 2109522 ~ 2113332 (+)
G169906 NA non-coding downstream 138586 2476276 ~ 2477466 (+)
G169922 NA non-coding downstream 168955 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 172089 2509779 ~ 2510694 (+)
G169927 NA non-coding downstream 210944 2548634 ~ 2588029 (+)
G169946 NA non-coding downstream 251250 2588940 ~ 2589235 (+)
CI01000034_01729413_01730790 EVE1 other upstream 586796 1729413 ~ 1731179 (+)
G169340 NA other upstream 1007095 1250219 ~ 1310878 (+)
G169394 NA other upstream 1124413 1150297 ~ 1193560 (+)
G169357 NA other upstream 1198954 1053543 ~ 1119019 (+)
G169309 NA other upstream 1348052 969261 ~ 969921 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1096446 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1787410 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1856948 4192311 ~ 4200636 (+)

Expression


Co-expression Network