Gene
RNA
| Item | Value |
|---|---|
| gene id | G171841 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 2403093 ~ 2428544 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195227 | True | 25428 | lncRNA | 0.39 | 2 | 2403093 | 2428544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_02295276_02337198 | TANC2A, TANC2 | coding | downstream | 65895 | 2295276 ~ 2337198 (-) |
| CI01000034_02182977_02213069 | HDAC5 | coding | downstream | 190024 | 2182964 ~ 2213069 (-) |
| CI01000034_02171666_02177554 | LSM12A, LSM12 | coding | downstream | 224695 | 2171604 ~ 2178398 (-) |
| CI01000034_02166509_02170478 | NA | coding | downstream | 232615 | 2166001 ~ 2170478 (-) |
| CI01000034_02154099_02162106 | NAGS | coding | downstream | 240987 | 2152595 ~ 2162106 (-) |
| CI01000034_02459679_02504620 | WNK4B | coding | upstream | 31135 | 2459679 ~ 2505022 (-) |
| CI01000034_02510595_02511512 | NA | coding | upstream | 81790 | 2510061 ~ 2511521 (-) |
| CI01000034_02513892_02532734 | ARHGAP27L | coding | upstream | 85334 | 2513878 ~ 2532734 (-) |
| CI01000034_02575638_02577407 | NA | coding | upstream | 146800 | 2575344 ~ 2577572 (-) |
| CI01000034_02581924_02584745 | NA | coding | upstream | 153035 | 2581579 ~ 2584745 (-) |
| G171849 | NA | non-coding | downstream | 237659 | 2163267 ~ 2165434 (-) |
| G171867 | NA | non-coding | downstream | 306785 | 2095850 ~ 2096308 (-) |
| G171860 | NA | non-coding | downstream | 328187 | 2074696 ~ 2074906 (-) |
| G171815 | NA | non-coding | downstream | 441444 | 1959454 ~ 1961649 (-) |
| G171745 | NA | non-coding | downstream | 449729 | 1952910 ~ 1953364 (-) |
| G171890 | NA | non-coding | upstream | 114619 | 2543163 ~ 2543769 (-) |
| G171907 | NA | non-coding | upstream | 161000 | 2589544 ~ 2589761 (-) |
| G171937 | NA | non-coding | upstream | 241612 | 2670156 ~ 2670385 (-) |
| G171939 | NA | non-coding | upstream | 242311 | 2670855 ~ 2671069 (-) |
| G171926 | NA | non-coding | upstream | 251134 | 2679678 ~ 2735927 (-) |
| G171755 | NA | other | downstream | 536720 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 1084839 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 1325871 | 1062444 ~ 1083413 (-) |
| CI01000034_00571856_00577732 | NA | other | downstream | 1818810 | 571856 ~ 577775 (-) |
| G171229 | NA | other | downstream | 2135847 | 229404 ~ 267246 (-) |
| G171835 | NA | other | upstream | 13277 | 2441821 ~ 2446293 (-) |
| G172016 | NA | other | upstream | 806419 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 962969 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 1737955 | 4165373 ~ 4172272 (-) |
