G169906


Basic Information

Item Value
gene id G169906
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2476276 ~ 2477466 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193025
ACTGGTGACTTTGCGGTAGATCTGCGCAGCGTTTTGGCACTCTGAGTAAGGGTACTCTGACGTGGTCATCTCCAGGATGCACATGCCGAAGGCATAAACATCCACAGCTTCATCATATTTCTCCTCGTACATCTCTGGAGCCATGAATTCTGGGGTTCCAATGACACTCTTAGCAAATGAGGCACTCTTGAGAGTGGCTAGGCCCAAATCACCAATCTTAACAGATCCAGTGGGGCCAGTGATGAAGATGTTGTCACATTTAAGGTCTCGGTGGATTATGGGAGGCGTTCGGGTGTGCAGGAAGTGAAGGCCCTTGAGGATCTGATGACTCCAACGCTGGAGAAGCTTTAGCTTCATCTCTTTGAACCTTTTCAGATACCTACAGGGAAACAGCAAGCAAGAATACTCTTAAGCTCAAAAACAGAGACAAACAACAAAAGGCAAACAAATTTGTGCTCTGTTCCAAAACATTGTAAACTGCCTACAAGGGGCAGCATTTTTAGGGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193025 True 509 lncRNA 0.46 2 2476276 2477466

Neighbor

gene id symbol gene type direction distance location
CI01000034_02421189_02423360 NA coding upstream 52749 2421026 ~ 2423527 (+)
CI01000034_02275470_02281951 CYB561 coding upstream 193672 2274601 ~ 2282604 (+)
CI01000034_02256162_02260170 NA coding upstream 215812 2255765 ~ 2260464 (+)
CI01000034_02231423_02231755 NA coding upstream 244152 2231303 ~ 2232124 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding upstream 529089 1900645 ~ 1947187 (+)
CI01000034_02550332_02552258 NA coding downstream 72866 2550332 ~ 2552839 (+)
CI01000034_02563086_02564052 NA coding downstream 85472 2562938 ~ 2564172 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 184743 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 210479 2687945 ~ 2705564 (+)
CI01000034_02770255_02774341 NA coding downstream 292633 2770099 ~ 2774567 (+)
G169760 NA non-coding upstream 172178 2235008 ~ 2304098 (+)
G169768 NA non-coding upstream 216472 2243834 ~ 2259804 (+)
G169686 NA non-coding upstream 294131 2170179 ~ 2182145 (+)
G169692 NA non-coding upstream 309350 2166484 ~ 2166926 (+)
G169706 NA non-coding upstream 362944 2109522 ~ 2113332 (+)
G169922 NA non-coding downstream 29179 2506645 ~ 2509031 (+)
G169921 NA non-coding downstream 32313 2509779 ~ 2510694 (+)
G169927 NA non-coding downstream 71168 2548634 ~ 2588029 (+)
G169946 NA non-coding downstream 111474 2588940 ~ 2589235 (+)
G169947 NA non-coding downstream 112895 2590361 ~ 2590615 (+)
G169806 NA other upstream 138586 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 745099 1729413 ~ 1731179 (+)
G169340 NA other upstream 1165398 1250219 ~ 1310878 (+)
G169394 NA other upstream 1282716 1150297 ~ 1193560 (+)
G169357 NA other upstream 1357257 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 956670 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1647634 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1717172 4192311 ~ 4200636 (+)

Expression


Co-expression Network