Gene
RNA
| Item | Value |
|---|---|
| gene id | G171890 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 2543163 ~ 2543769 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195279 | True | 607 | lncRNA | 0.33 | 1 | 2543163 | 2543769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_02513892_02532734 | ARHGAP27L | coding | downstream | 10429 | 2513878 ~ 2532734 (-) |
| CI01000034_02510595_02511512 | NA | coding | downstream | 31651 | 2510061 ~ 2511521 (-) |
| CI01000034_02459679_02504620 | WNK4B | coding | downstream | 38141 | 2459679 ~ 2505022 (-) |
| CI01000034_02295276_02337198 | TANC2A, TANC2 | coding | downstream | 205965 | 2295276 ~ 2337198 (-) |
| CI01000034_02182977_02213069 | HDAC5 | coding | downstream | 330094 | 2182964 ~ 2213069 (-) |
| CI01000034_02575638_02577407 | NA | coding | upstream | 31575 | 2575344 ~ 2577572 (-) |
| CI01000034_02581924_02584745 | NA | coding | upstream | 37810 | 2581579 ~ 2584745 (-) |
| CI01000034_02585852_02587541 | GH1 | coding | upstream | 41863 | 2585632 ~ 2587541 (-) |
| CI01000034_02596578_02625089 | SCN4AB | coding | upstream | 52400 | 2596169 ~ 2625407 (-) |
| CI01000034_02673701_02680445 | NA | coding | upstream | 129752 | 2673521 ~ 2680753 (-) |
| G171841 | NA | non-coding | downstream | 114619 | 2403093 ~ 2428544 (-) |
| G171849 | NA | non-coding | downstream | 377729 | 2163267 ~ 2165434 (-) |
| G171867 | NA | non-coding | downstream | 446855 | 2095850 ~ 2096308 (-) |
| G171860 | NA | non-coding | downstream | 468257 | 2074696 ~ 2074906 (-) |
| G171815 | NA | non-coding | downstream | 581514 | 1959454 ~ 1961649 (-) |
| G171907 | NA | non-coding | upstream | 45775 | 2589544 ~ 2589761 (-) |
| G171937 | NA | non-coding | upstream | 126387 | 2670156 ~ 2670385 (-) |
| G171939 | NA | non-coding | upstream | 127086 | 2670855 ~ 2671069 (-) |
| G171926 | NA | non-coding | upstream | 135909 | 2679678 ~ 2735927 (-) |
| G171920 | NA | non-coding | upstream | 222321 | 2766090 ~ 2774240 (-) |
| G171835 | NA | other | downstream | 96870 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 676790 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 1224909 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 1465941 | 1062444 ~ 1083413 (-) |
| G172016 | NA | other | upstream | 691194 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 847744 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 1622730 | 4165373 ~ 4172272 (-) |
| CI01000034_04216451_04218876 | NA | other | upstream | 1672443 | 4216212 ~ 4221881 (-) |
| G172593 | NA | other | upstream | 2449191 | 4992960 ~ 4994943 (-) |
