Gene
RNA
| Item | Value |
|---|---|
| gene id | G171926 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 2679678 ~ 2735927 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195338 | True | 1383 | lncRNA | 0.37 | 3 | 2679678 | 2735927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_02596578_02625089 | SCN4AB | coding | downstream | 54271 | 2596169 ~ 2625407 (-) |
| CI01000034_02585852_02587541 | GH1 | coding | downstream | 92137 | 2585632 ~ 2587541 (-) |
| CI01000034_02581924_02584745 | NA | coding | downstream | 94933 | 2581579 ~ 2584745 (-) |
| CI01000034_02575638_02577407 | NA | coding | downstream | 102106 | 2575344 ~ 2577572 (-) |
| CI01000034_02513892_02532734 | ARHGAP27L | coding | downstream | 146944 | 2513878 ~ 2532734 (-) |
| CI01000034_02778206_02786310 | CDC27 | coding | upstream | 41773 | 2777700 ~ 2786310 (-) |
| CI01000034_02875948_02953386 | CRHR2, CRHR1 | coding | upstream | 139731 | 2875658 ~ 2954520 (-) |
| CI01000034_03247806_03248810 | NA | coding | upstream | 511867 | 3247794 ~ 3248947 (-) |
| CI01000034_03250695_03253982 | NA | coding | upstream | 514475 | 3250402 ~ 3254202 (-) |
| CI01000034_03255619_03266388 | NA | coding | upstream | 519341 | 3255268 ~ 3267690 (-) |
| G171939 | NA | non-coding | downstream | 8609 | 2670855 ~ 2671069 (-) |
| G171937 | NA | non-coding | downstream | 9293 | 2670156 ~ 2670385 (-) |
| G171907 | NA | non-coding | downstream | 89917 | 2589544 ~ 2589761 (-) |
| G171890 | NA | non-coding | downstream | 135909 | 2543163 ~ 2543769 (-) |
| G171841 | NA | non-coding | downstream | 251134 | 2403093 ~ 2428544 (-) |
| G171920 | NA | non-coding | upstream | 30163 | 2766090 ~ 2774240 (-) |
| G171927 | NA | non-coding | upstream | 40013 | 2775940 ~ 2776384 (-) |
| G171946 | NA | non-coding | upstream | 59231 | 2795158 ~ 2795444 (-) |
| G171947 | NA | non-coding | upstream | 62984 | 2798911 ~ 2799189 (-) |
| G171960 | NA | non-coding | upstream | 109302 | 2845229 ~ 2845621 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 168157 | 2510061 ~ 2511521 (-) |
| G171835 | NA | other | downstream | 233385 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 813305 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 1361424 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 1602456 | 1062444 ~ 1083413 (-) |
| G172016 | NA | other | upstream | 499036 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 655586 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 1430572 | 4165373 ~ 4172272 (-) |
| CI01000034_04216451_04218876 | NA | other | upstream | 1480285 | 4216212 ~ 4221881 (-) |
| G172593 | NA | other | upstream | 2257033 | 4992960 ~ 4994943 (-) |
