Gene
RNA
| Item | Value |
|---|---|
| gene id | G171927 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 2775940 ~ 2776384 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195339 | True | 445 | lncRNA | 0.35 | 1 | 2775940 | 2776384 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_02712912_02755978 | KANSL1B | coding | downstream | 19962 | 2712687 ~ 2755978 (-) |
| CI01000034_02673701_02680445 | NA | coding | downstream | 95187 | 2673521 ~ 2680753 (-) |
| CI01000034_02596578_02625089 | SCN4AB | coding | downstream | 150533 | 2596169 ~ 2625407 (-) |
| CI01000034_02585852_02587541 | GH1 | coding | downstream | 188399 | 2585632 ~ 2587541 (-) |
| CI01000034_02581924_02584745 | NA | coding | downstream | 191195 | 2581579 ~ 2584745 (-) |
| CI01000034_02778206_02786310 | CDC27 | coding | upstream | 1316 | 2777700 ~ 2786310 (-) |
| CI01000034_02875948_02953386 | CRHR2, CRHR1 | coding | upstream | 99274 | 2875658 ~ 2954520 (-) |
| CI01000034_03247806_03248810 | NA | coding | upstream | 471410 | 3247794 ~ 3248947 (-) |
| CI01000034_03250695_03253982 | NA | coding | upstream | 474018 | 3250402 ~ 3254202 (-) |
| CI01000034_03255619_03266388 | NA | coding | upstream | 478884 | 3255268 ~ 3267690 (-) |
| G171920 | NA | non-coding | downstream | 1700 | 2766090 ~ 2774240 (-) |
| G171926 | NA | non-coding | downstream | 40013 | 2679678 ~ 2735927 (-) |
| G171939 | NA | non-coding | downstream | 104871 | 2670855 ~ 2671069 (-) |
| G171937 | NA | non-coding | downstream | 105555 | 2670156 ~ 2670385 (-) |
| G171907 | NA | non-coding | downstream | 186179 | 2589544 ~ 2589761 (-) |
| G171946 | NA | non-coding | upstream | 18774 | 2795158 ~ 2795444 (-) |
| G171947 | NA | non-coding | upstream | 22527 | 2798911 ~ 2799189 (-) |
| G171960 | NA | non-coding | upstream | 68845 | 2845229 ~ 2845621 (-) |
| G172048 | NA | non-coding | upstream | 368220 | 3144604 ~ 3144832 (-) |
| G172022 | NA | non-coding | upstream | 375497 | 3151881 ~ 3171535 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 264419 | 2510061 ~ 2511521 (-) |
| G171835 | NA | other | downstream | 329647 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 909567 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 1457686 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 1698718 | 1062444 ~ 1083413 (-) |
| G172016 | NA | other | upstream | 458579 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 615129 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 1390115 | 4165373 ~ 4172272 (-) |
| CI01000034_04216451_04218876 | NA | other | upstream | 1439828 | 4216212 ~ 4221881 (-) |
| G172593 | NA | other | upstream | 2216576 | 4992960 ~ 4994943 (-) |
