G171947



Basic Information


Item Value
gene id G171947
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2798911 ~ 2799189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU195359
TGAGGCATCACACAGTTGCTGAATCTCTTGAATCTCTGTGAATCTCTTGTTCCATCACATCCCAAAGGTGCTCTATTGGACATTTGAGTACAGTGAACTCATTGTCATGTTAAAAAAAAAACAGTTTGAGATGATTTGAGCTTTGTGACATTGAGCGTTATCCTGCTAGAAGTAGCCATCAGAAGATGGGTACACTGTGGTCATAAAGGGATGGACATGGTCAGCAACAATACTCAGGTAGGCTGTGGCATTTAAAGATGCTCAGTTGGTACTAAGGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU195359 True 279 lncRNA 0.42 1 2798911 2799189

Neighbor


gene id symbol gene type direction distance location
CI01000034_02778206_02786310 CDC27 coding downstream 12601 2777700 ~ 2786310 (-)
CI01000034_02712912_02755978 KANSL1B coding downstream 42933 2712687 ~ 2755978 (-)
CI01000034_02673701_02680445 NA coding downstream 118158 2673521 ~ 2680753 (-)
CI01000034_02596578_02625089 SCN4AB coding downstream 173504 2596169 ~ 2625407 (-)
CI01000034_02585852_02587541 GH1 coding downstream 211370 2585632 ~ 2587541 (-)
CI01000034_02875948_02953386 CRHR2, CRHR1 coding upstream 76469 2875658 ~ 2954520 (-)
CI01000034_03247806_03248810 NA coding upstream 448605 3247794 ~ 3248947 (-)
CI01000034_03250695_03253982 NA coding upstream 451213 3250402 ~ 3254202 (-)
CI01000034_03255619_03266388 NA coding upstream 456079 3255268 ~ 3267690 (-)
CI01000034_03285980_03289258 NA coding upstream 486601 3285790 ~ 3289258 (-)
G171946 NA non-coding downstream 3467 2795158 ~ 2795444 (-)
G171927 NA non-coding downstream 22527 2775940 ~ 2776384 (-)
G171920 NA non-coding downstream 24671 2766090 ~ 2774240 (-)
G171926 NA non-coding downstream 62984 2679678 ~ 2735927 (-)
G171939 NA non-coding downstream 127842 2670855 ~ 2671069 (-)
G171960 NA non-coding upstream 46040 2845229 ~ 2845621 (-)
G172048 NA non-coding upstream 345415 3144604 ~ 3144832 (-)
G172022 NA non-coding upstream 352692 3151881 ~ 3171535 (-)
G172031 NA non-coding upstream 390723 3189912 ~ 3190509 (-)
G172020 NA non-coding upstream 411517 3210706 ~ 3214094 (-)
CI01000034_02510595_02511512 NA other downstream 287390 2510061 ~ 2511521 (-)
G171835 NA other downstream 352618 2441821 ~ 2446293 (-)
G171755 NA other downstream 932538 1864118 ~ 1866373 (-)
CI01000034_01312431_01312780 PRR15LA other downstream 1480657 1311529 ~ 1312780 (-)
CI01000034_01062505_01083413 NA other downstream 1721689 1062444 ~ 1083413 (-)
G172016 NA other upstream 435774 3234963 ~ 3236615 (-)
G172151 NA other upstream 592324 3391144 ~ 3451802 (-)
CI01000034_04165535_04172272 KCTD13 other upstream 1367310 4165373 ~ 4172272 (-)
CI01000034_04216451_04218876 NA other upstream 1417023 4216212 ~ 4221881 (-)
G172593 NA other upstream 2193771 4992960 ~ 4994943 (-)

Expression



Co-expression Network