Gene
RNA
| Item | Value |
|---|---|
| gene id | G171960 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 2845229 ~ 2845621 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195372 | True | 393 | lncRNA | 0.29 | 1 | 2845229 | 2845621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_02778206_02786310 | CDC27 | coding | downstream | 58919 | 2777700 ~ 2786310 (-) |
| CI01000034_02712912_02755978 | KANSL1B | coding | downstream | 89251 | 2712687 ~ 2755978 (-) |
| CI01000034_02673701_02680445 | NA | coding | downstream | 164476 | 2673521 ~ 2680753 (-) |
| CI01000034_02596578_02625089 | SCN4AB | coding | downstream | 219822 | 2596169 ~ 2625407 (-) |
| CI01000034_02585852_02587541 | GH1 | coding | downstream | 257688 | 2585632 ~ 2587541 (-) |
| CI01000034_02875948_02953386 | CRHR2, CRHR1 | coding | upstream | 30037 | 2875658 ~ 2954520 (-) |
| CI01000034_03247806_03248810 | NA | coding | upstream | 402173 | 3247794 ~ 3248947 (-) |
| CI01000034_03250695_03253982 | NA | coding | upstream | 404781 | 3250402 ~ 3254202 (-) |
| CI01000034_03255619_03266388 | NA | coding | upstream | 409647 | 3255268 ~ 3267690 (-) |
| CI01000034_03285980_03289258 | NA | coding | upstream | 440169 | 3285790 ~ 3289258 (-) |
| G171947 | NA | non-coding | downstream | 46040 | 2798911 ~ 2799189 (-) |
| G171946 | NA | non-coding | downstream | 49785 | 2795158 ~ 2795444 (-) |
| G171927 | NA | non-coding | downstream | 68845 | 2775940 ~ 2776384 (-) |
| G171920 | NA | non-coding | downstream | 70989 | 2766090 ~ 2774240 (-) |
| G171926 | NA | non-coding | downstream | 109302 | 2679678 ~ 2735927 (-) |
| G172048 | NA | non-coding | upstream | 298983 | 3144604 ~ 3144832 (-) |
| G172022 | NA | non-coding | upstream | 306260 | 3151881 ~ 3171535 (-) |
| G172031 | NA | non-coding | upstream | 344291 | 3189912 ~ 3190509 (-) |
| G172020 | NA | non-coding | upstream | 365085 | 3210706 ~ 3214094 (-) |
| G172025 | NA | non-coding | upstream | 381738 | 3227359 ~ 3231997 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 333708 | 2510061 ~ 2511521 (-) |
| G171835 | NA | other | downstream | 398936 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 978856 | 1864118 ~ 1866373 (-) |
| CI01000034_01312431_01312780 | PRR15LA | other | downstream | 1526975 | 1311529 ~ 1312780 (-) |
| CI01000034_01062505_01083413 | NA | other | downstream | 1768007 | 1062444 ~ 1083413 (-) |
| G172016 | NA | other | upstream | 389342 | 3234963 ~ 3236615 (-) |
| G172151 | NA | other | upstream | 545892 | 3391144 ~ 3451802 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 1320878 | 4165373 ~ 4172272 (-) |
| CI01000034_04216451_04218876 | NA | other | upstream | 1370591 | 4216212 ~ 4221881 (-) |
| G172593 | NA | other | upstream | 2147339 | 4992960 ~ 4994943 (-) |
