XLOC_009040 (CT573316.3)


Basic Information

Item Value
gene id XLOC_009040
gene name CT573316.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 10756210 ~ 10759101 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017821
TTCGAAACCGAAATACCCTTTGCGAGATTCGCCGCATCTATTCCTGATTTTCGTTCAAAAATGCCTGCTTAATTATTTCATAGCAGGACCAAACATGCCTTAAGAAAAGGAGTACGTTTGAAAATTTAGGAACCATAAAAAGTACACCAGGTGAATGCCTTTCTACTCCAGGAAGCCGCAGCATACGCCTGAAGGAGGAAGAGGACGCGGTCAGTTTGAAATAAGTGTTGTGATGGAGCTAAACCTGTATACAAGGGAACTAACACATTTGAGGAAAAAAGAATTCAAAATAAGAGATTGGTGTGTGTGGTGAGGGCAAAAAAGTCCACAGCAGCATCCTGGAAATGCTGtaatgcaggggtgcccaaacttagtTCTGGacggctggtgtcctgcagagtttagagtCAACTTCAAGTAAACTCTGCAAGACAGCAGCAGTTCTGGACTGAGTTTGGCCACTCCTGTTCTCCTGTAGTGAATTGAACAAGACCCTGCATCAGTCCACCTGCCCTTGTGTCCTCATCTGGACCAGATGTTGCTGTGGTCTCTTCATCATCCGTATCTCGGGCATGGACTGCCATGCATCACCGTCCTGTTTCAGTCTGACTGCAGCAATGAGGCATGTGATGATGGCGAAGTCCCTCTGATCATCTGCAGAACTGGCCCAGCTTTGTGGAGATACAGTTAAACATGGGCTTCTGCCTGTAATACATCTCTGTTAGAATAAAGCttggttttatttgttgttgacttgtatttatttgtcatgattattcatattcattattttaataatataattatgtttctatttttaatgaataatgtaAGAAAATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097687

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017821 True 840 lncRNA 0.42 3 10756210 10759101

Neighbor

gene id symbol gene type direction distance location
XLOC_009038 tenm4 coding downstream 300641 10000553 ~ 10455569 (-)
XLOC_009039 AL807754.1 coding downstream 570041 10186054 ~ 10186169 (-)
XLOC_009037 nars2 coding downstream 1124618 9601637 ~ 9631592 (-)
XLOC_009036 gab2 coding downstream 1162678 9444982 ~ 9593532 (-)
XLOC_009035 sacs coding downstream 1334729 9367101 ~ 9421481 (-)
XLOC_009041 BX293559.2 coding upstream 214616 10973717 ~ 10986106 (-)
XLOC_009042 BX293559.1 coding upstream 338768 11097869 ~ 11099720 (-)
XLOC_009043 prcp coding upstream 459145 11218246 ~ 11303691 (-)
XLOC_009044 rab30 coding upstream 549361 11308462 ~ 11341635 (-)
XLOC_009045 NA coding upstream 655590 11414691 ~ 11423104 (-)
XLOC_009031 NA non-coding downstream 1564933 9189153 ~ 9191277 (-)
XLOC_009028 CR847977.1 non-coding downstream 1768451 8987643 ~ 8987759 (-)
XLOC_009025 NA non-coding downstream 2154116 8599591 ~ 8602094 (-)
XLOC_009023 NA non-coding downstream 2361609 8350029 ~ 8394601 (-)
XLOC_009047 NA non-coding upstream 1059383 11818484 ~ 11825881 (-)
XLOC_009048 NA non-coding upstream 1111083 11870184 ~ 11875956 (-)

Expression


Co-expression Network