Gene
RNA
| Item | Value |
|---|---|
| gene id | G172228 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 3575477 ~ 3575688 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195673 | True | 212 | lncRNA | 0.47 | 1 | 3575477 | 3575688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_03285980_03289258 | NA | coding | downstream | 286219 | 3285790 ~ 3289258 (-) |
| CI01000034_03255619_03266388 | NA | coding | downstream | 307787 | 3255268 ~ 3267690 (-) |
| CI01000034_03250695_03253982 | NA | coding | downstream | 321275 | 3250402 ~ 3254202 (-) |
| CI01000034_03247806_03248810 | NA | coding | downstream | 326530 | 3247794 ~ 3248947 (-) |
| CI01000034_02875948_02953386 | CRHR2, CRHR1 | coding | downstream | 620957 | 2875658 ~ 2954520 (-) |
| CI01000034_03577874_03611044 | NA | coding | upstream | 1766 | 3577454 ~ 3611099 (-) |
| CI01000034_03659420_03661699 | NXPH3 | coding | upstream | 83602 | 3659290 ~ 3661699 (-) |
| CI01000034_03803160_03827982 | NGFRA | coding | upstream | 227144 | 3802832 ~ 3827982 (-) |
| CI01000034_03911480_03913846 | TMUB2 | coding | upstream | 335387 | 3911075 ~ 3913846 (-) |
| CI01000034_03915853_03921269 | ASB16 | coding | upstream | 340063 | 3915751 ~ 3921269 (-) |
| G172227 | NA | non-coding | downstream | 59 | 3575211 ~ 3575418 (-) |
| G172226 | NA | non-coding | downstream | 772 | 3574357 ~ 3574705 (-) |
| G172225 | NA | non-coding | downstream | 1292 | 3573915 ~ 3574185 (-) |
| G172222 | NA | non-coding | downstream | 4046 | 3571213 ~ 3571431 (-) |
| G172170 | NA | non-coding | downstream | 88553 | 3486714 ~ 3486924 (-) |
| G172234 | NA | non-coding | upstream | 10659 | 3586347 ~ 3586576 (-) |
| G172235 | NA | non-coding | upstream | 12468 | 3588156 ~ 3588357 (-) |
| G172240 | NA | non-coding | upstream | 21904 | 3597592 ~ 3597878 (-) |
| G172346 | NA | non-coding | upstream | 274893 | 3850581 ~ 3850902 (-) |
| G172314 | NA | non-coding | upstream | 295040 | 3870728 ~ 3874382 (-) |
| G172151 | NA | other | downstream | 177664 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 338862 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 1063956 | 2510061 ~ 2511521 (-) |
| G171835 | NA | other | downstream | 1129184 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 1709104 | 1864118 ~ 1866373 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | upstream | 590811 | 4165373 ~ 4172272 (-) |
| CI01000034_04216451_04218876 | NA | other | upstream | 640524 | 4216212 ~ 4221881 (-) |
| G172593 | NA | other | upstream | 1417272 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 2213344 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 2221882 | 5795835 ~ 5811781 (-) |
