G172378



Basic Information


Item Value
gene id G172378
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4116483 ~ 4116934 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU195829
CGAACAGTGAGCTTGTGCCTGGTACAGTATTTTCCTCTGCTGGCGCATCTATGTTCTCCTCTTTGCGTCCATATTCAGCGTTTGCCTGCTTTAACGTCCTCTTTACAGACTTCGTAATATTTCCACACAAATGACAGTCTGGGAAATGATTGCAAAGCAGTTTGCTTGAAAGTCCAGAAAAGAGATTGGCCAAAATAAAACTAAAAACCGTTCGGATTTATGGCTAGTACCATACATCTCTTTTTTTTTTTATTATTATTATTGTTCAATTCATTCCCCGGGCCGGATTGGACACCTTTGTGGGCCGTATTCGGCCCGTGGGCCGTATGTTTGACACCCCTGGGCTTCATGGAAAATTTAAAGCAGTTTATTTAATTTGCATCTTTCTTTTAATGTATTTGTCCTTGTTTTTTCTATGCTGATGTTGCCTTCTGCAATAATAATAATAATAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU195829 True 452 lncRNA 0.39 1 4116483 4116934

Neighbor


gene id symbol gene type direction distance location
CI01000034_04101415_04114654 ITGB3A coding downstream 1829 4100622 ~ 4114654 (-)
CI01000034_04090497_04095923 NA coding downstream 20560 4090232 ~ 4095923 (-)
CI01000034_04087755_04088054 NA coding downstream 27719 4087563 ~ 4088764 (-)
CI01000034_04065210_04081772 TLK2 coding downstream 34711 4064519 ~ 4081772 (-)
CI01000034_04019323_04045212 MRC2 coding downstream 71271 4019240 ~ 4045212 (-)
CI01000034_04154954_04164874 NA coding upstream 37717 4154651 ~ 4164874 (-)
CI01000034_04165535_04172272 KCTD13 coding upstream 48439 4165373 ~ 4172272 (-)
CI01000034_04174469_04189564 SEZ6L2 coding upstream 57482 4174416 ~ 4189564 (-)
CI01000034_04216451_04218876 NA coding upstream 99300 4216212 ~ 4221881 (-)
CI01000034_04239062_04242494 NA coding upstream 121837 4238771 ~ 4242640 (-)
G172297 NA non-coding downstream 52322 4063892 ~ 4064161 (-)
G172366 NA non-coding downstream 69343 4046675 ~ 4047140 (-)
G172298 NA non-coding downstream 99789 4012500 ~ 4016694 (-)
G172316 NA non-coding downstream 179017 3934545 ~ 3937466 (-)
G172303 NA non-coding downstream 183866 3931628 ~ 3932617 (-)
G172379 NA non-coding upstream 45 4116979 ~ 4117214 (-)
G172384 NA non-coding upstream 8185 4125119 ~ 4126846 (-)
G172398 NA non-coding upstream 84879 4201813 ~ 4202052 (-)
G172402 NA non-coding upstream 95520 4212454 ~ 4212802 (-)
G172411 NA non-coding upstream 141621 4258555 ~ 4258786 (-)
G172151 NA other downstream 718670 3391144 ~ 3451802 (-)
G172016 NA other downstream 879868 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 1604962 2510061 ~ 2511521 (-)
G171835 NA other downstream 1670190 2441821 ~ 2446293 (-)
G171755 NA other downstream 2250110 1864118 ~ 1866373 (-)
G172593 NA other upstream 876026 4992960 ~ 4994943 (-)
G172800 NA other upstream 1672098 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1680636 5795835 ~ 5811781 (-)

Expression



Co-expression Network