Gene
RNA
| Item | Value |
|---|---|
| gene id | G172379 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 4116979 ~ 4117214 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195830 | True | 236 | lncRNA | 0.41 | 1 | 4116979 | 4117214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_04101415_04114654 | ITGB3A | coding | downstream | 2325 | 4100622 ~ 4114654 (-) |
| CI01000034_04090497_04095923 | NA | coding | downstream | 21056 | 4090232 ~ 4095923 (-) |
| CI01000034_04087755_04088054 | NA | coding | downstream | 28215 | 4087563 ~ 4088764 (-) |
| CI01000034_04065210_04081772 | TLK2 | coding | downstream | 35207 | 4064519 ~ 4081772 (-) |
| CI01000034_04019323_04045212 | MRC2 | coding | downstream | 71767 | 4019240 ~ 4045212 (-) |
| CI01000034_04154954_04164874 | NA | coding | upstream | 37437 | 4154651 ~ 4164874 (-) |
| CI01000034_04165535_04172272 | KCTD13 | coding | upstream | 48159 | 4165373 ~ 4172272 (-) |
| CI01000034_04174469_04189564 | SEZ6L2 | coding | upstream | 57202 | 4174416 ~ 4189564 (-) |
| CI01000034_04216451_04218876 | NA | coding | upstream | 99020 | 4216212 ~ 4221881 (-) |
| CI01000034_04239062_04242494 | NA | coding | upstream | 121557 | 4238771 ~ 4242640 (-) |
| G172378 | NA | non-coding | downstream | 45 | 4116483 ~ 4116934 (-) |
| G172297 | NA | non-coding | downstream | 52818 | 4063892 ~ 4064161 (-) |
| G172366 | NA | non-coding | downstream | 69839 | 4046675 ~ 4047140 (-) |
| G172298 | NA | non-coding | downstream | 100285 | 4012500 ~ 4016694 (-) |
| G172316 | NA | non-coding | downstream | 179513 | 3934545 ~ 3937466 (-) |
| G172384 | NA | non-coding | upstream | 7905 | 4125119 ~ 4126846 (-) |
| G172398 | NA | non-coding | upstream | 84599 | 4201813 ~ 4202052 (-) |
| G172402 | NA | non-coding | upstream | 95240 | 4212454 ~ 4212802 (-) |
| G172411 | NA | non-coding | upstream | 141341 | 4258555 ~ 4258786 (-) |
| G172412 | NA | non-coding | upstream | 142052 | 4259266 ~ 4259613 (-) |
| G172151 | NA | other | downstream | 719166 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 880364 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 1605458 | 2510061 ~ 2511521 (-) |
| G171835 | NA | other | downstream | 1670686 | 2441821 ~ 2446293 (-) |
| G171755 | NA | other | downstream | 2250606 | 1864118 ~ 1866373 (-) |
| G172593 | NA | other | upstream | 875746 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 1671818 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 1680356 | 5795835 ~ 5811781 (-) |
