Gene
RNA
| Item | Value |
|---|---|
| gene id | G172420 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 4289847 ~ 4290095 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195879 | True | 249 | lncRNA | 0.45 | 1 | 4289847 | 4290095 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_04239062_04242494 | NA | coding | downstream | 47207 | 4238771 ~ 4242640 (-) |
| CI01000034_04216451_04218876 | NA | coding | downstream | 67966 | 4216212 ~ 4221881 (-) |
| CI01000034_04174469_04189564 | SEZ6L2 | coding | downstream | 100283 | 4174416 ~ 4189564 (-) |
| CI01000034_04165535_04172272 | KCTD13 | coding | downstream | 117575 | 4165373 ~ 4172272 (-) |
| CI01000034_04154954_04164874 | NA | coding | downstream | 124973 | 4154651 ~ 4164874 (-) |
| CI01000034_04318823_04319740 | FOXD3, FOXD1 | coding | upstream | 28449 | 4318544 ~ 4320127 (-) |
| CI01000034_04350907_04363668 | NA | coding | upstream | 60511 | 4350606 ~ 4363683 (-) |
| CI01000034_04370706_04374491 | SPC24 | coding | upstream | 80531 | 4370626 ~ 4375413 (-) |
| CI01000034_04376314_04386958 | NA | coding | upstream | 86219 | 4376314 ~ 4386958 (-) |
| CI01000034_04392399_04400096 | LDLR, LDLRA | coding | upstream | 102105 | 4392200 ~ 4400096 (-) |
| G172419 | NA | non-coding | downstream | 11692 | 4277853 ~ 4278155 (-) |
| G172415 | NA | non-coding | downstream | 18352 | 4265083 ~ 4271495 (-) |
| G172414 | NA | non-coding | downstream | 26012 | 4263326 ~ 4263835 (-) |
| G172413 | NA | non-coding | downstream | 28584 | 4260970 ~ 4261263 (-) |
| G172412 | NA | non-coding | downstream | 30234 | 4259266 ~ 4259613 (-) |
| G172421 | NA | non-coding | upstream | 558 | 4290653 ~ 4290854 (-) |
| G172422 | NA | non-coding | upstream | 1436 | 4291531 ~ 4291746 (-) |
| G172475 | NA | non-coding | upstream | 44054 | 4334149 ~ 4334773 (-) |
| G172480 | NA | non-coding | upstream | 66218 | 4356313 ~ 4356554 (-) |
| G172456 | NA | non-coding | upstream | 115540 | 4405635 ~ 4409237 (-) |
| G172151 | NA | other | downstream | 892034 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 1053232 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 1778326 | 2510061 ~ 2511521 (-) |
| G172593 | NA | other | upstream | 702865 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 1498937 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 1507475 | 5795835 ~ 5811781 (-) |
