Gene
RNA
| Item | Value |
|---|---|
| gene id | G172488 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 4468934 ~ 4469211 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195960 | True | 278 | lncRNA | 0.33 | 1 | 4468934 | 4469211 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_04466151_04467388 | RLN3A | coding | downstream | 1454 | 4465852 ~ 4467480 (-) |
| CI01000034_04451917_04454531 | NA | coding | downstream | 14403 | 4451459 ~ 4454531 (-) |
| CI01000034_04431146_04446849 | SMARCA4A, SMARCA4 | coding | downstream | 21766 | 4431146 ~ 4447168 (-) |
| CI01000034_04392399_04400096 | LDLR, LDLRA | coding | downstream | 68838 | 4392200 ~ 4400096 (-) |
| CI01000034_04376314_04386958 | NA | coding | downstream | 81976 | 4376314 ~ 4386958 (-) |
| CI01000034_04630595_04640739 | NA | coding | upstream | 161330 | 4630541 ~ 4640987 (-) |
| CI01000034_04652096_04678983 | TMEM104 | coding | upstream | 182723 | 4651934 ~ 4679037 (-) |
| CI01000034_04690669_04706837 | NA | coding | upstream | 221276 | 4690487 ~ 4706959 (-) |
| CI01000034_04710539_04725888 | TNPO2, TNPO2.S | coding | upstream | 240202 | 4709413 ~ 4725888 (-) |
| CI01000034_04823597_04824920 | NA | coding | upstream | 354110 | 4823321 ~ 4825135 (-) |
| G172456 | NA | non-coding | downstream | 59697 | 4405635 ~ 4409237 (-) |
| G172480 | NA | non-coding | downstream | 112380 | 4356313 ~ 4356554 (-) |
| G172475 | NA | non-coding | downstream | 134161 | 4334149 ~ 4334773 (-) |
| G172422 | NA | non-coding | downstream | 177188 | 4291531 ~ 4291746 (-) |
| G172421 | NA | non-coding | downstream | 178080 | 4290653 ~ 4290854 (-) |
| G172504 | NA | non-coding | upstream | 29793 | 4499004 ~ 4499747 (-) |
| G172507 | NA | non-coding | upstream | 46660 | 4515871 ~ 4516396 (-) |
| G172508 | NA | non-coding | upstream | 47282 | 4516493 ~ 4516717 (-) |
| G172509 | NA | non-coding | upstream | 47692 | 4516903 ~ 4517633 (-) |
| G172511 | NA | non-coding | upstream | 51102 | 4520313 ~ 4520840 (-) |
| CI01000034_04216451_04218876 | NA | other | downstream | 251192 | 4216212 ~ 4221881 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | downstream | 296764 | 4165373 ~ 4172272 (-) |
| G172151 | NA | other | downstream | 1071121 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 1232319 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 1957413 | 2510061 ~ 2511521 (-) |
| G172593 | NA | other | upstream | 523749 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 1319821 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 1328359 | 5795835 ~ 5811781 (-) |
