Gene
RNA
| Item | Value |
|---|---|
| gene id | G172626 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 4841265 ~ 4841496 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196112 | True | 232 | lncRNA | 0.40 | 1 | 4841265 | 4841496 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_04823597_04824920 | NA | coding | downstream | 16130 | 4823321 ~ 4825135 (-) |
| CI01000034_04710539_04725888 | TNPO2, TNPO2.S | coding | downstream | 115377 | 4709413 ~ 4725888 (-) |
| CI01000034_04690669_04706837 | NA | coding | downstream | 134306 | 4690487 ~ 4706959 (-) |
| CI01000034_04652096_04678983 | TMEM104 | coding | downstream | 162228 | 4651934 ~ 4679037 (-) |
| CI01000034_04630595_04640739 | NA | coding | downstream | 200278 | 4630541 ~ 4640987 (-) |
| CI01000034_04870434_04878415 | SLC5A11 | coding | upstream | 28865 | 4870361 ~ 4878415 (-) |
| CI01000034_04887739_04917230 | GRID2IPA | coding | upstream | 46221 | 4887717 ~ 4917230 (-) |
| CI01000034_04921458_04934523 | E4F1 | coding | upstream | 79673 | 4921169 ~ 4934523 (-) |
| CI01000034_04951993_04959847 | NA | coding | upstream | 110034 | 4951530 ~ 4959847 (-) |
| CI01000034_04978655_04981311 | HAGH, HAGH.L, HAGHL | coding | upstream | 136578 | 4978074 ~ 4981311 (-) |
| G172551 | NA | non-coding | downstream | 218878 | 4622142 ~ 4622387 (-) |
| G172542 | NA | non-coding | downstream | 233049 | 4607979 ~ 4608216 (-) |
| G172541 | NA | non-coding | downstream | 233489 | 4607523 ~ 4607776 (-) |
| G172539 | NA | non-coding | downstream | 234818 | 4606073 ~ 4606447 (-) |
| G172535 | NA | non-coding | downstream | 240801 | 4600248 ~ 4600464 (-) |
| G172627 | NA | non-coding | upstream | 1958 | 4843454 ~ 4845428 (-) |
| G172633 | NA | non-coding | upstream | 106385 | 4947881 ~ 4948092 (-) |
| G172609 | NA | non-coding | upstream | 143382 | 4984878 ~ 4986139 (-) |
| CI01000034_04988799_04990480 | MSRB1A, MSRB1 | non-coding | upstream | 145843 | 4988681 ~ 4990480 (-) |
| G172643 | NA | non-coding | upstream | 210904 | 5052400 ~ 5052726 (-) |
| CI01000034_04216451_04218876 | NA | other | downstream | 623523 | 4216212 ~ 4221881 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | downstream | 669095 | 4165373 ~ 4172272 (-) |
| G172151 | NA | other | downstream | 1443452 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 1604650 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 2329744 | 2510061 ~ 2511521 (-) |
| G172593 | NA | other | upstream | 151464 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 947536 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 956074 | 5795835 ~ 5811781 (-) |
