XLOC_009053 (dscaml1)


Basic Information

Item Value
gene id XLOC_009053
gene name dscaml1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 12071037 ~ 12229874 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017837
ATGCGGAACATTACAGCTGTGGCTGGACGTAACACATTCATTAATTGTCGTGTGATTGGGTACCCCTATTACTCCATCAAGTGGTATAAAGATGGGATGCTGTTACCAGACAACCATCGCCAGGTTGTATATGAGAATGGCACTCTGAAGTTGAGCGATGTGCAGAAGGGCATGGATGAAGGGGCGTATCTGTGCAGTGTGCTCATCCAACCCCAGCTCTCCATCAGCCAGACTGTCTATGTCACAGTTAAAGTTCCTCCCCTTATCCAGCCCTTTGACTTTCCTCCCACCTCCATTGGTAAGCTGATGTACATAGCCTGTGTGGTGTCCTCCGGAGACATGCCAATCCGGATCACCTGGAGAAAGGACGGGCAGGAGATTGTGTCGGGAACAGCAGGAGTCACCATCGAAACCAAGGAGTTCATGAGTTCCCTTCAGATCTCTAAAGTTTCACTTAAGCACAATGGAAACTACACCTGTATTGCCAGCAATGACGCAGCAACTGTCAGTTCAGAGCGACAACTAATAGTAACAGTTCCCCCTCGCTTTCGGGTTCAGCCTAATAACCAGGATGGTATCTATGGCAAGTCAGAGGTTCTAAACTGCTCTGTTGAAGGGTACCCTCCACCCAAAGTTGTTTGGAAACATGCCAAAGgtATAGGAAACCCCCAGCAGTACCATCCGGTTCCACTGACAGGTCGTATTCAAATCCTATCCAATGGTTCTCTGCTGATCCGCCATGTTCTAGAAGAAGATCGGGGATACTACTTGTGTCAGGCCAGCAATGGAGTGGGATCAGACATCAGCAAAAGCATGATGCTTACTGTTAAAATTCCAGCTATGATCACATCGCATCCTAACACCACCATGGCCATAAAGGGACAGAACAAGGAGTTAAACTGCACTGCCCGGGGTGAATACCCTATCATCATCCGCTGGGAGCGAGGTGACACCGTTATTGACCCTGACCGCAACCCTCGCTACTCCATCACCACCAGCCCCAATGAGAAGAGCGATGAAGTTATCTCCACACTAAAACTGAAGCCAGCAGAGCGTGGGGATTCTGTCTTTTTCTCCTGCCACGCCATCAACTCATACGGCGAGGGTCGAGGGCTCATCCAGCTGACAGTGCAAGAACCCCCTGACCCCCCAGAGCTTGAGGTTCGAGAAGTCAAAGATCGTAGTATGAACCTAAGGTGGACGCAGAGGTTTGACGGCAACAGCATAATCACCAGCTATGACATTGAGTACAAGAACAAATCCGACCCGTGGGAGCTGAAACATGCCACCCGTAAGATCTCACCCACTAACAACCAAGCCAACATAGTAGAGCTCCACCCGGCGTCTGTCTACAGCATCCGCATGTACTCCTACAACAAGATCGGACGCAGTCAAGCCAGCAAAGAGCTGACCATCAGCACAGAGGAAGCACCTCCTGATGGGCCACCCATGGAAGTGATTTTACAGCCAATGACTTCTCAAAGTATCCGCGTCACCTGGAAGGCACCTAAGAAAGAGCTCCAAAATGGAGTGATTCGAGGCTATCAAATTGGTTATAGGGAGAACGGACCAGGCAGTAATGGACAGTACAGTATAGTGGAGATGAAAGCCACAGGTGACAGCGAGGTCTACACTCTGGATAACTTGAAGAAGTTTGCTCAGTATGGTGTGGTGGTCCAGGCCTTCAACCGAGCTGGAACTGGACCTTCCAGCTCTGAGATCAATGCCACAACACTTGAAGATGTTCCCAGCCAGCCACCCCAGAATGTTCGGGCCATAACAGTGACATCAGATGAGGCAGTGATCACGTGGTCTGAGCCCCCAAGGATGACCCTGAATGGGGTTCTGAAGGGCTACCGTGTGGTGTTCTGGTCCCTCTACCCCGATGGAGGTGGGTGCTGTGGGGGCCAGACACTGGGGCTCAACCAGAAATGGGGAGAGATGCAGAACATCACTACCACTCGTGAGCAGGTGGAACTGAAGGGGCTGGAGAAGTTCACAAACTACAGCGTTCAGGTCCTGGCCTACACACAGGCAGGAGATGGGGTCCGCAGCAACGTTCTCTACATACAGACCCGAGAAGACCACCCTGGTCCTCCAGCAGGCATCAAAGCAGTGCCATCTTCTGCCAGCAGTGTGGTGGTATCCTGGCTTCCCCCTGTCAAGCCCAATGGTATTATCCGAAAATACACCATTTACTGTTCCAGCCCAGGATCGGGCCAACCGGCACCCAGTGAATACGAAGCCAACCCTGAGCTGTTAATATACAGAATCACCCACCTGACCCGGGGTCAGCAGTATCTGATCTGGGCAGCTGCTGTCACCACTGCTGGTAGGGGCAACATTAGCGAGAAGGTGACTGTGGAGCCCGCTGGGAAAGCTCCTGCTAAAATCCTGTCTTTTGGTGGAACTGTGACCACTCCATGGATGAAGGAAGTCCGGCTGCCATGCAGCTCTGTGGGAGAGCCAACACCAACAATCAAATGGACCAAAGACAGTGAGGACACTGCAATCCCAGTCACTCAAGATGGTCACCGGAATATTCTTTCAAATGGTACCCTGGTGCTACGCTCTGTGAAAGCCGAGGATTCTGGGTACTACACCTGCACAGCCACCAACACGCTGGGGTTTGACACAATCATCGTGAACTTGCTGGTACAAGTGCCTCCAGACCAACCACGTTTGACCGTTTCCACCACGTCCACCTCTTCTATCACTCTGGCTTGGATTCCTGGAGACAACGGAGGAAGCTCCATCAGAGGTTTCGTGCTGCAATATTCAGTAGACAACACTGAGGAGTGGAAGGACGTTTTCATCAGCTCCAGTGAAAGATCTTTCAAGTTGGACAACCTGCGCTGTGGCACCTGGTACAAGGTTAAACTGGCTGCAAAAAACAGTGTGGGAGCCGGTCGCATCAGCGAGATCATTGAAGCCAAGACTCACGGCAGAGagcCACAGTTCAATAAGGACCAGCCTCTCTTCACTCACATCAACTCCACTCATGCACGCATGAACCTGCAGGGCTGGACAAGTGGGGGCTGCCCCATCACCGCTGTCCTGTTAGAGTTCCGCCCCAAAGGCACCTGGGCCTGGCAGAGTGTGCGCACCAACGCCTCGGCAGACATCTTCCTTGCAGAGCTGCGTGAGGCCACCTGGTATGAGCTGAAGATGAAGGCCTGCAACAGCGCCGGCTGTGGAAACCAGAGCTCCCAGTTTGCCACTCTGGATTATGATGGGAGCACAATTCCGCCTATTAAGTCAGCACGAGGGGAAGGAGATGATGTTAAAAAGCTTTTCTCTATCGGCTGTCCTGTCATCCTGGTCACATTGGGTATGGCTCTGCTCTTTATTATCCGCAAGAAACGCAAGGAAAAAAGACTCAAGAGACTCAGAGATGCGAAGAGCTTGGCTGAGATGCTTATCAGCAGTAAGAACAATCGAAGTTTTGACACTCCAGTAAAAGGCCCACCTCAGGGACCTCGACTACACATTGATATCCCACGCGTGCAGCTTCTTATTGAGGATAAAGAAGGAATCAAACAAATAGGTGAAGACAAGGCCACCATCCCTGTGACCGACACTGAGTTCAGCCAATCGGTGAACCCTCAGAGCTTCTGTACGGGCGTGTCTGTGCATCACCCCGCCCTCATCCAGAACACAGGCCCTTTGATTGACATGTCAGACATCAGGCCGGGCACCAATCCAGTATCGAGGAAGAGTGTGAAATCTGCACACAGCACAAGAAACCGCTATTCAAGCCAGTGGACTCTGACTAAATGCCAGGCATCCACACCTGCTCGCACTCTCACCTCAGACTGGCGGACAGTGGGCTCGCAGCATGGCATTACAGTTACAGAGAGTGACAGCTACAGTGCCAGCTTGTCCCAGGACACAGATAAGGGACGTAACAGTATGGTGTCTACAGAAAGTGCGTCTTCCACATACGAGGAGTTGGCCAGAGCATACGAACATGCTAAGCTGGAGGAGCACCTACAACATGCCAAGTTTGAGATTACAGAGTGCTTCATCTCCGATAGCTCCTCTGATCAGATGACCACTGGCACCAATGATAACGCAGACAGCATGACCTCTATGAGCACGCCATCTGAACCAGGAATCTGTCGCTTCACTGCCTCTCCACCCAAACCACAGGATTATGACCGTGGCAAAAACGTGGCAGTGCCCATACCCCATCGAGCCAACAAGAGTGAGTACTGTAACCTCCCCCTATACATGAAGACGGACCCTTTCTTCCGAAAACAGGCAGAACTGCACGATCCCTGCCCGGTGGTCCCGCCTCGCGAAGCCTCCATCCGGAGCCTCGCTGCCCGGGCCTATCACACACAGGGTCGTCACATGACATTAGACCCCTCCAAACAGCAGGCCCTGACACTGGGCCATGGTGGCTTGAGCAGCCTGACCAGCTCAGGGGCCTCTGGTACATCGGGCCCACCCTCAAGCGGGGCCGCTGGGAGCTCCAGCATCAGCTCAGGCACAGCCACCCTGCCCCAGAGGACTCTCACCATGCCCAGCACCTCCTCCACATCCTCAGCCCCAAGTGGGGCAGTTGCCGCTGGAGCAGGAGCGAGTGCAAGCTCCACAGGAGGCAGCGGCCCGACGCCCGGGAGCTCCAAGGTTGGAGGATCCAGAGACTCTCTGCTAGAGAGCAGCTCGTCCGGGCTAGGCAGACTGCAAAAGCAGAATGCTGGGGCATACTCCAAATCCTACACTCTGGTGTAG
>TCONS_00017838
AAGTCGCTTCTTCCTCTTTTTCAGCAGCGTCACACCGATACACAGTTGCTGGTGGTAAAAGGTAAGCCACTGATACCGcggaaaatacaaataaaaagatcCGTCGTGCGTAAAAATCAGTCATTTAGTTCCCAGGTGCGCACTGGGTGCCACAGAATGCCCTTGCTGTCTCCAGCCACGTGGACcgctcacaacaacaacaacaacaacaacaacacattaagTCCTGTCCTCTCGAATGCACTCAACCCACCCCCACCAACAAAACTCCGCGCGCCGTCCTCTTCGCGTCTCACTCTGGCCCCGCACCAGCACCTCTCCATCCCGCCGTACCATTAGACTACCGAAGGAGGGGCCGCTCGAATGACGGTCCCGCGGATGGGAGGGTACGAGAGGCGGGACCAAAGTCTTCCCTGCTTCTCGGTGCTGGAGAGTCCGGGACTAGGGCTGGAGAGATCGCCGGGGAGCATCGTCACCACTCCTGCACGGAGCCTAGCCTGGCCAAATACTGCACGGTGCACACGTCGGGATTGCAAAACATTCCTGAGAAATATACCTGCTATTTATGGCATGTGGCTGGTAACTTTACTCCTGCTGTATTCTTTTCAAGAAGTGCACAGCGAGGATGTGGTCTCGACGCGGCTGTACTTTGTGAATGCTTCCCTGCAGAGAGTGACCTTCTCCAGCTCAGTGGGGGTGTCCCTGCCCTGTCCTGCGGGTGGCGCCCCCCATGCCGTCCTCCGCTGGTACCTGGCCACTGGCGACGACATCTACGACGTGCCACACATCCGCCACGTTCACGCCAACGGCACGCTGCAGCTCTACCCCTTCTCCCCCTCTGCCTTCAACAGCTTCATTCATGATAATGACTACTTCTGCACTGCCGAGAACCAGGCCGGCAAGATCCGCAGCCCTAGCATCCGTGTCAAAGCAGTGTTCAGGGAACCTTACACGGTTCGCGTGGCGGACCAAAGATCCATGCGGGGCAACGTGGCCGTCTTCAAGTGCCTCATCCCCTCTGCTGTGCAGGAGTACGTCAGTGTGGTGTCTTGGGAGAAGGACACTGTCTCCATCGTCCCAGGTAACAGGTTTTTCCTGACGTCATATGGGGCCCTCTACATATCTGACGTTCAGAAAGAGGATGCCCTCTCTACCTACCGCTGCATCACCAAGCACAAATACAGTGGAGAAACAAGGCAGAGCAATGGGGCCCGTCTTTCTGTTCTGGATCCCACTGAGTCCACGCCTTCTGTGATGGATAGTTTCCAGTCAGGAGAGGTACAAGTGGGACGCAGCATAGAGTTGCCCTGCATTGCATCCGGTTACCCCAATCCCACCATCCGTTGGCTAAAAGATGGGAGGCCACTTCCTGCAGATTCCCGCTGGACACGGCGACTGACTGGCCTAACAATCAGTGACCTCCGCCTAGAGGACTCTGGAAACTACATCTGTGAAGTCACCAACAGCTTTGGCTCCAAAGAGGTCACAGGACACCTTAATGTCATTGAGCCTCTGAGAGTCACATTATCTCCCAAGAACCTAAAAACCGGCATTAGCAGCACAGTGATTCTATCCTGTGCCGTTCAGGGCTCACCTCACTTTACCGTCTCCTGGTTCCGCAACACAGAACCCATTGTGCCTGACCAGCATTTCTCCATCCAGGGAGCCCACAATGAGACACTCTTCATCACGGCGGCCCAGAAAAGACACTCAGGGGCATATCAGTGTTTTGCCACCCGCAAGGGTCAAACAGCACAAGATTTCTCAATCATACTGCTTGAGGATGGCACCCCAAGGATTGTCTCGTCTTTCAGTGAACGAGTGGTAGCCCCTGGCGAGCCCTTCTCTCTCATGTGTGCAGCCAAAGGTGCCCCTCCACCCACCATCACCTGGACACTGGATGATGAGCCGGTAGCGCGGGACTCGGCGCACCGGGCCAGCCAGTACACGCTCTCCGACGGCTCCACTGTCTCACATGTCAACGTCACCAACCCCCAGATCCGCGACGGGGGCGTGTACCGCTGCGCCGCACGCAACTCGGCCGGTAGCGCCGAGTACCAAGCGCGCATAAACGTAAGAGGTCCTCCCAGTATCCGGGCCATGCGGAACATTACAGCTGTGGCTGGACGTAACACATTCATTAATTGTCGTGTGATTGGGTACCCCTATTACTCCATCAAGTGGTATAAAGATGGGATGCTGTTACCAGACAACCATCGCCAGGTTGTATATGAGAATGGCACTCTGAAGTTGAGCGATGTGCAGAAGGGCATGGATGAAGGGGCGTATCTGTGCAGTGTGCTCATCCAACCCCAGCTCTCCATCAGCCAGACTGTCTATGTCACAGTTAAAGTTCCTCCCCTTATCCAGCCCTTTGACTTTCCTCCCACCTCCATTGGTAAGCTGATGTACATAGCCTGTGTGGTGTCCTCCGGAGACATGCCAATCCGGATCACCTGGAGAAAGGACGGGCAGGAGATTGTGTCGGGAACAGCAGGAGTCACCATCGAAACCAAGGAGTTCATGAGTTCCCTTCAGATCTCTAAAGTTTCACTTAAGCACAATGGAAACTACACCTGTATTGCCAGCAATGACGCAGCAACTGTCAGTTCAGAGCGACAACTAATAGTAACAGTTCCCCCTCGCTTTCGGGTTCAGCCTAATAACCAGGATGGTATCTATGGCAAGTCAGAGGTTCTAAACTGCTCTGTTGAAGGGTACCCTCCACCCAAAGTTGTTTGGAAACATGCCAAAGgtATAGGAAACCCCCAGCAGTACCATCCGGTTCCACTGACAGGTCGTATTCAAATCCTATCCAATGGTTCTCTGCTGATCCGCCATGTTCTAGAAGAAGATCGGGGATACTACTTGTGTCAGGCCAGCAATGGAGTGGGATCAGACATCAGCAAAAGCATGATGCTTACTGTTAAAATTCCAGCTATGATCACATCGCATCCTAACACCACCATGGCCATAAAGGGACAGAACAAGGAGTTAAACTGCACTGCCCGGGGTGAATACCCTATCATCATCCGCTGGGAGCGAGCTGAAGCCAGCAGAGCGTGGGGATTCTGTCTTTTTCTCCTGCCACGCCATCAACTCATACGGCGAGGGTCGAGGGCTCATCCAGCTGACAAACCCCCTGACCCCCCAGAGCTTGAGGTTCGAGAAGTCAAAGATCGTAGTATGAACCTAAGGTGGACGCAGAGGTTTGACGGCAACAGCATAATCACCAGCTATGACATTGAGTACAAGAACAAATCCGACCCGTGGGAGCTGAAACATGCCACCCGTAAGATCTCACCCACTAACAACCAAGCCAACATAGTAGAGCTCCACCCGGCGTCTGTCTACAGCATCCGCATGTACTCCTACAACAAGATCGGACGCAGTCAAGCCAGCAAAGAGCTGACCATCAGCACAGAGGAAGCACCTCCTGATGGGCCACCCATGGAAGTGATTTTACAGCCAATGACTTCTCAAAGTATCCGCGTCACCTGGAAGGCACCTAAGAAAGAGCTCCAAAATGGAGTGATTCGAGGCTATCAAATTGGTTATAGGGAGAACGGACCAGGCAGTAATGGACAGTACAGTATAGTGGAGATGAAAGCCACAGGTGACAGCGAGGTCTACACTCTGGATAACTTGAAGAAGTTTGCTCAGTATGGTGTGGTGGTCCAGGCCTTCAACCGAGCTGGAACTGGACCTTCCAGCTCTGAGATCAATGCCACAACACTTGAAGATGTTCCCAGCCAGCCACCCCAGAATGTTCGGGCCATAACAGTGACATCAGATGAGGCAGTGATCACGTGGTCTGAGCCCCCAAGGATGACCCTGAATGGGGTTCTGAAGGGCTACCGTGTGGTGTTCTGGTCCCTCTACCCCGATGGAGAATGGGGAGAGATGCAGAACATCACTACCACTCGTGAGCAGGTGGAACTGAAGGGGCTGGAGAAGTTCACAAACTACAGCGTTCAGGTCCTGGCCTACACACAGGCAGGAGATGGGGTCCGCAGCAACGTTCTCTACATACAGACCCGAGAAGACCACCCTGGTCCTCCAGCAGGCATCAAAGCAGTGCCATCTTCTGCCAGCAGTGTGGTGGTATCCTGGCTTCCCCCTGTCAAGCCCAATGGTATTATCCGAAAATACACCATTTACTGTTCCAGCCCAGGATCGGGCCAACCG

Function

symbol description
dscaml1 Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to act upstream of or within cell adhesion and central nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in axon and plasma membrane. Is expressed in brain; ciliary marginal zone; retinal ganglion cell layer; and retinal inner nuclear layer. Used to study ocular motility disease and ocular motor apraxia, Cogan type.

GO: NA

KEGG:

id description
ko04515 Cell adhesion molecules

Ensembl:

ensembl_id ENSDARG00000098057

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017837 False 4740 mRNA 0.53 26 12071037 12113045
TCONS_00017838 True 4188 mRNA 0.54 20 12089352 12229874

Neighbor

gene id symbol gene type direction distance location
XLOC_009052 si:dkey-202l22.6 coding downstream 59647 12004777 ~ 12011390 (-)
XLOC_009051 NA coding downstream 78134 11989063 ~ 11992903 (-)
XLOC_009050 CR848025.1 coding downstream 94777 11976143 ~ 11976260 (-)
XLOC_009049 PRLHR coding downstream 114056 11952956 ~ 11956981 (-)
XLOC_009048 NA coding downstream 195081 11870184 ~ 11875956 (-)
XLOC_009054 si:dkey-36i7.3 coding upstream 21170 12251044 ~ 12270857 (-)
XLOC_009055 fxyd6 coding upstream 44073 12273947 ~ 12319134 (-)
XLOC_009056 tmprss13a coding upstream 96287 12326161 ~ 12360409 (-)
XLOC_009057 NA coding upstream 181110 12410984 ~ 12416138 (-)
XLOC_009058 scn4ba coding upstream 236978 12466852 ~ 12500938 (-)
XLOC_009047 NA non-coding downstream 245156 11818484 ~ 11825881 (-)
XLOC_009045 NA non-coding downstream 647933 11414691 ~ 11423104 (-)
XLOC_009059 NA non-coding upstream 286314 12516188 ~ 12545683 (-)
XLOC_009061 BX897750.1 non-coding upstream 1594598 13824472 ~ 13824604 (-)
XLOC_009063 NA non-coding upstream 1832739 14062613 ~ 14064350 (-)
XLOC_009068 NA non-coding upstream 1999374 14229248 ~ 14232070 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000308_00836074_00942387 DSCAML1 coding CI01000308 null 836074 ~ 942387 (+)