CI01000037_03873766_03874592


Basic Information

Item Value
gene id CI01000037_03873766_03874592
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3873646 ~ 3874684 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_03873766_03874592.mRNA
AGATCTTTGTGGTGGGCAGCGATGTCACTTTATGGTGTACCGATAATGCCACTGATGTCAAATTGAATGAATTCATTTATGTTGTGTGGAACATGAGCATGCAAGGCAAAAAATGTTATCTTGGTTTGTCACACAAACTGGATGACACTTGTAATGATGGAAAGAAGCTGAACAACACTTCATTTTCCTTATTCATTCCCAATATTTCAATGGAAGATGAAGGAAGAAGCAATGCTGTAAATATCTCTGTAAGCGTTACTCGCCTGGAAACTCAGCTGGACAGTGAAAATGGTCAGAGGATTGCTGTCTGTAAGGCCACATATAAAGAGACGGAACCCACTCTTCACTGGGAACCTGCCTTGAACTTTTCCTCCAAAAACACTTTTCCCAAGAAGGTTGACACGTTTTTTATTATGGAGAATCGTGTACATCTGCCTAATGATGTGACCATCAGTACCCTCACCTGCGTGGCCTCATACCCCTCTGTGTCCGGCTCTGTGCAGCATAAGAGCACACTTGATCTTACAACACAAGGTGAATACACTGTGTTTTAAAATGAATTGACAATTGTTCTGCTACAAGCAATTTTACAGTGCATTCAGAAACTATTCACACCCCTTAATACTGTTTACATTTTTATGTTGCAGCCTTATGTTAAAATGCTTTAAATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_03873766_03874592.mRNA True 674 mRNA 0.40 2 3873646 3874684

Neighbor

gene id symbol gene type direction distance location
CI01000037_03863512_03865949 ING1 coding downstream 7278 3863222 ~ 3866368 (-)
CI01000037_03800223_03800920 RAB20 coding downstream 70719 3799799 ~ 3802927 (-)
CI01000037_03626104_03650769 COL4A1 coding downstream 222877 3626010 ~ 3650769 (-)
CI01000037_03517736_03521602 IRS2B coding downstream 350652 3515949 ~ 3522994 (-)
CI01000037_02878351_02882111 NA coding downstream 991527 2878325 ~ 2882119 (-)
CI01000037_03989733_04001865 CBSB coding upstream 114356 3989040 ~ 4002063 (-)
CI01000037_04002977_04005591 NA coding upstream 127737 4002421 ~ 4007994 (-)
CI01000037_04011298_04017585 U2AF1, U2AF1.S coding upstream 136468 4011152 ~ 4017684 (-)
CI01000037_04066520_04067107 NA coding upstream 191513 4066197 ~ 4067512 (-)
CI01000037_04074235_04077036 NA coding upstream 199008 4073692 ~ 4077036 (-)
G177289 NA non-coding downstream 198740 3673421 ~ 3674906 (-)
G177252 NA non-coding downstream 315688 3557741 ~ 3557958 (-)
G177201 NA non-coding downstream 391876 3481547 ~ 3481770 (-)
G177198 NA non-coding downstream 393682 3479756 ~ 3479964 (-)
G177108 NA non-coding downstream 540664 3311094 ~ 3332982 (-)
G177398 NA non-coding upstream 148752 4023436 ~ 4023638 (-)
G177399 NA non-coding upstream 149962 4024646 ~ 4025338 (-)
G177411 NA non-coding upstream 160415 4035099 ~ 4035514 (-)
G177418 NA non-coding upstream 177596 4052280 ~ 4052770 (-)
G177426 NA non-coding upstream 299095 4173779 ~ 4174224 (-)
G177030 NA other downstream 585775 3201220 ~ 3295082 (-)
CI01000037_00810683_00834155 FER1L6 other downstream 3062562 808740 ~ 834155 (-)
G175333 NA other downstream 3245266 624132 ~ 628380 (-)
CI01000037_00104304_00104988 SMO3B, SUMO3, SUMO3A, SUMO4, SUMO3B other downstream 3767883 103396 ~ 104988 (-)
G177361 NA other upstream 15742 3890426 ~ 3891088 (-)
G177391 NA other upstream 119132 3993816 ~ 3994781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G11961 NA non-coding NC_047595.1 CM018541.1 21475423 ~ 21523715 (-)