G174662


Basic Information

Item Value
gene id G174662
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 814090 ~ 814591 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198387
CCTGGTCTATTCCTGGTTTGTCCTTGAGGTAGAGTGCGCGAGTTTCAATATGCTCTGGGACAAGTTTACAGGCCCCACTGGTCAACTCAGGCCACCTGTGCAGCACCTTTAGAGCCAAGTGCTCGTACGACTCCACCATCTGATCTGTGAAGCAGCAGCAAGCACATTGCTCCTTTGGTTGTTAATCAACATCATGATGTAAACCAAAAGAGTGACATACCTTCATCAGCAAATACAGTTTTCCCTGTGAAGACTTTGTTTCCTATGGTAATGCGTCCTGGAGAAAAGTGAGGGTTGTCCAGTCTGTTTTCTTTGCAAAGCTTAATCAACAGGTCCGCTGGTTTGATGCAGTCCCTCCATGCATTATAACCCTCACTAGGTGACATGAGATTGTCAATTGACGCATCAAGAATGGGCATCAAACTAACTTGAGAAGACCGTAAATGTTACAATATAAATACTCACATGGCATATTCAGTAGGCAGACCACAGGTAGCTCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198387 True 502 lncRNA 0.45 1 814090 814591

Neighbor

gene id symbol gene type direction distance location
CI01000037_00808744_00809273 NA coding upstream 4217 808744 ~ 809873 (+)
CI01000037_00796721_00807196 NA coding upstream 6756 795352 ~ 807334 (+)
CI01000037_00784200_00785176 NA coding upstream 28914 783585 ~ 785176 (+)
CI01000037_00775538_00779866 NA coding upstream 34003 775538 ~ 780087 (+)
CI01000037_00729466_00733346 NA coding upstream 79980 729017 ~ 734110 (+)
CI01000037_00874555_00887437 NA coding downstream 59896 874487 ~ 888017 (+)
CI01000037_00987906_00988350 NA coding downstream 173315 987859 ~ 989246 (+)
CI01000037_01075201_01076456 NA coding downstream 259383 1073974 ~ 1076489 (+)
CI01000037_01098540_01104541 NA coding downstream 283481 1098072 ~ 1105186 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 856295 1670886 ~ 1673145 (+)
G174656 NA non-coding upstream 22950 790857 ~ 791140 (+)
G174633 NA non-coding upstream 104549 705041 ~ 709541 (+)
CI01000037_00633378_00678193 ABI2, ABI2A non-coding upstream 167055 633338 ~ 679180 (+)
G174580 NA non-coding upstream 310112 503746 ~ 503978 (+)
G174576 NA non-coding upstream 316718 497079 ~ 497372 (+)
G174663 NA non-coding downstream 191 814782 ~ 816038 (+)
G174666 NA non-coding downstream 5822 820413 ~ 820916 (+)
G174668 NA non-coding downstream 12305 826896 ~ 827476 (+)
G174669 NA non-coding downstream 13346 827937 ~ 828140 (+)
G174670 NA non-coding downstream 14482 829073 ~ 829343 (+)
CI01000037_00228809_00230442 NA other upstream 583694 228809 ~ 230730 (+)
G174949 NA other downstream 799285 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 1151151 1965603 ~ 1966435 (+)
G176346 NA other downstream 2025169 2839760 ~ 2840053 (+)

Expression


Co-expression Network