XLOC_000091 (SLC5A10)


Basic Information

Item Value
gene id XLOC_000091
gene name SLC5A10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 8110562 ~ 8163167 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000178
ATGGCGTTTAACTCCACCACCAAATTTTTCGCTCTTTCCCAGTCTTTCAGCGTGTCCGATATCATTGTGATCGGAGCGTATTTTTTATTGAACGTCGCAGTTGGAATATGGtcatCCTGCAGAGTGAGCCGAAACACACTCAGTGGATATTTTCTGGCCGGTAGAGACATGGCTTGGTGGCCGATCGGCGCGTCTCTGTTCGCCAGCAGCGAGGGCTCCGGGCTCTTCATCGGTCTGGCGGGGACCGGAGCCGCGGGAGGAATCGCTGTGGCCGGATTTGAATGGAATGCAACTTATGCCTTGCTGGCTCTTGCCTGGGTCTTTGTCCCAGTTTATGTGTCCTCTGGGatTGTCACAATGCCAGAGTATCTGGGTCGGCGGTTTGGAGGAGAGAGAATTCGCATGTACTTGTCAGCTCTCAGTCTGCTGCTGTCTGTGTTTACCAAGATCTCGACGGATCTGTACTCTGGAGCCCTGTTTGTCCAGGTGTGTTTGGGCTGGAATCTCTACCTCTCCACTGTGCTCATGCTGGTCGTCACTGCCCTCTACACTATTGCAGGTGGCTTGGCTGCTGTAATCTACACCGACACTCTTCAGACCTTCATCATGATCATCGGAGCTGTCATCCTCACCATCACGGCATTCAACAAAATTGGAGGCTACAGTAACCTGGAGAGCGTGTATTTGCAAGCCGTGCCGTCCAAGATCATCCCGAACACGACATGTCACCTGCCCAGACATGATGCCATGCACCTGTTCAGAGACCCAGTGCATGGAGATCTTCCCTGGCCAGGCATGACGCTGGGATTAACCATCATTGCAACATGGTACTGGTGCACGGATCAGGTAATCGTGCAGAGGTCTCTGTCAGCCAAGAGTCTGAGTCATGCCAAAGGAGCGTCCATCTTTGCCAGCTATCTCAAGTTGCTTCCCATGATGTTCATCATCTTACCTGGCATGATCAGCAGGGCACTGTACCCAGACACAGTGGCTTGTGTGGACCCTGAAGAGTGTGTGAAGGTGTGTGGCGCAGAGGTGGGCTGCTCCAACATTGCTTTTCCTAAACTGGTCATCGAACTCATGCCTAGCGGCCTTCGGGGGTTAATGATAGCTGTAATGATGGCCGCATTGATGTCATCACTTACCTCCATCTTCAACAGCAGCAGCACCCTCTTCACCATGGACATCTGGAAGAAATATCGAAGAGGTGCAAGCGAAAAAGAGCTGCTACTTGTTGGCAGGATAGTGACTGTCATTCTGGTGGTGATCAGCGTGGTGTGGATCCCAATTCTTCAGAGTGCTAACAGCGGTCAGCTCTATGTTTACATCCAGTCGGTGACCAGCTATCTGGCCCCTCCTGTTACTGCCATTTTTGTAATGGCGGTTTTTTGGAAAAGAACCAACGAAGCGGGAGCGTTCTGGGGCCTGATGGTGGGTTTAGTGGTGGGATTGACACGGATGGTCCTGGAGTTTGCGTTTCCTCCCCCTCGCTGTGGCGTGTTTGACCCTGCTCCCTCTGTCTTGAGGAGTATGCACTACCTGCACTTCGCCATCATACTGTGTGCCCTCACTGCTATAGTAGTGGCTGTGATCAGTCTATTGACCCCTCCACCCACTGAGGAACAGacaCGTAATCTTACATGGTGGACTCTCCACAACAGCACCGAGAGAGAAATCCCTCTGCAGAAAGTCTCTACACTCAGCCGCAGGACAGACGGCTGTGAGTCTGTGCGCAGGGGTAAATGTGTCCGCACCGCTGGCTTCTGCAGCCCTCGACCAGGCCGTTTCGCATCCGGGACTCCACCCCCCATCATTCACAGCACCACAGAAGATCCCTTCTGGTCTCGTTTCTGCTGTGTCAATGCCATCATTCTCATGTGCGTTAACATCTTCCTCTATGCTTACTACGCATAA
>TCONS_00000179
tcatCCTGCAGAGTGAGCCGAAACACACTCAGTGGATATTTTCTGGCCGGTAGAGACATGGCTTGGTGGCCGATCGGCGCGTCTCTGTTCGCCAGCAGCGAGGGCTCCGGGCTCTTCATCGGTCTGGCGGGGACCGGAGCCGCGGGAGGAATCGCTGTGGCCGGATTTGAATGGAATGCAACTTATGCCTTGCTGGCTCTTGCCTGGGTCTTTGTCCCAGTTTATGTGTCCTCTGGGatTGTCACAATGCCAGAGTATCTGGGTCGGCGGTTTGGAGGAGAGAGAATTCGCATGTACTTGTCAGCTCTCAGTCTGCTGCTGTCTGTGTTTACCAAGATCTCGACGGATCTGTACTCTGGAGCCCTGTTTGTCCAGGTGTGTTTGGGCTGGAATCTCTACCTCTCCACTGTGCTCATGCTGGTCGTCACTGCCCTCTACACTATTGCAGGTGGCTTGGCTGCTGTAATCTACACCGACACTCTTCAGACCTTCATCATGATCATCGGAGCTGTCATCCTCACCATCACGGCATTCAACAAAATTGGAGGCTACAGTAACCTGGAGAGCGTGTATTTGCAAGCCGTGCCGTCCAAGATCATCCCGAACACGACATGTCACCTGCCCAGACATGATGCCATGCACCTGTTCAGAGACCCAGTGCATGGAGATCTTCCCTGGCCAGGCATGACGCTGGGATTAACCATCATTGCAACATGGTACTGGTGCACGGATCAGGTAATCGTGCAGAGGTCTCTGTCAGCCAAGAGTCTGAGTCATGCCAAAGGAGCGTCCATCTTTGCCAGCTATCTCAAGTTGCTTCCCATGATGTTCATCATCTTACCTGGCATGATCAGCAGGGCACTGTACCCAGACACAGTGGCTTGTGTGGACCCTGAAGAGTGTGTGAAGGTGTGTGGCGCAGAGGTGGGCTGCTCCAACATTGCTTTTCCTAAACTGGTCATCGAACTCATGCCTAGCGGCCTTCGGGGGTTAATGATAGCTGTAATGATGGCCGCATTGATGTCATCACTTACCTCCATCTTCAACAGCAGCAGCACCCTCTTCACCATGGACATCTGGAAGAAATATCGAAGAGGTGCAAGCGAAAAAGAGCTGCTACTTGTTGGCAGGATAGTGACTGTCATTCTGGTGGTGATCAGCGTGGTGTGGATCCCAATTCTTCAGAGTGCTAACAGCGGTCAGCTCTATGTTTACATCCAGTCGGTGACCAGCTATCTGGCCCCTCCTGTTACTGCCATTTTTGTAATGGCGGTTTTTTGGAAAAGAACCAACGAAGCGGGAGCGTTCTGGGGCCTGATGGTGGGTTTAGTGGTGGGATTGACACGGATGGTCCTGGAGTTTGCGTTTCCTCCCCCTCGCTGTGGCGTGTTTGACCCTGCTCCCTCTGTCTTGAGGAGTATGCACTACCTGCACTTCGCCATCATACTGTGTGCCCTCACTGCTATAGTAGTGGCTGTGATCAGTCTATTGACCCCTCCACCCACTGAGGAACAGacaCGTAATCTTACATGGTGGACTCTC

Function

symbol description
slc5a10 Predicted to enable glucose:sodium symporter activity. Predicted to be involved in sodium ion transport. Located in extracellular exosome.

GO: NA

KEGG:

id description
ko02000 Transporters

Ensembl:

ensembl_id ENSDARG00000074212

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000178 False 1914 mRNA 0.52 15 8110562 8163167
TCONS_00000179 True 1542 mRNA 0.53 13 8111009 8159970

Neighbor

gene id symbol gene type direction distance location
XLOC_000090 CR855320.2 coding upstream 121248 7988052 ~ 7989314 (+)
XLOC_000089 CR855320.1 coding upstream 148866 7956030 ~ 7961696 (+)
XLOC_000088 en1b coding upstream 427190 7679328 ~ 7683372 (+)
XLOC_000087 NA coding upstream 436333 7672121 ~ 7674229 (+)
XLOC_000086 pcnp coding upstream 549340 7556965 ~ 7561222 (+)
XLOC_000092 cacna1hb coding downstream 141737 8304904 ~ 8404005 (+)
XLOC_000093 myo15ab coding downstream 278904 8442071 ~ 8507230 (+)
XLOC_000094 alkbh5 coding downstream 345586 8508753 ~ 8516595 (+)
XLOC_000095 mief2 coding downstream 358156 8521323 ~ 8532009 (+)
XLOC_000096 smcr8b coding downstream 371531 8534698 ~ 8540050 (+)
XLOC_000084 NA non-coding upstream 597800 7512529 ~ 7512762 (+)
XLOC_000082 CABZ01075319.1 non-coding upstream 994648 7092273 ~ 7115914 (+)
XLOC_000081 CU929161.1 non-coding upstream 1046619 7063837 ~ 7063943 (+)
XLOC_000080 NA non-coding upstream 1120535 6956913 ~ 6990027 (+)
XLOC_000097 NA non-coding downstream 410610 8573777 ~ 8575057 (+)
XLOC_000098 AL928650.2 non-coding downstream 412140 8575307 ~ 8577274 (+)
XLOC_000100 NA non-coding downstream 424063 8587230 ~ 8590636 (+)
XLOC_000105 NA non-coding downstream 787707 8950874 ~ 8965939 (+)
XLOC_000106 NA non-coding downstream 804312 8967479 ~ 8976422 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000300_00103395_00123529 SLC5A10 coding CI01000300 null 103395 ~ 123529 (+)