G174731


Basic Information

Item Value
gene id G174731
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1022442 ~ 1023487 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198465
GCCTCTAACAGGTCACCATGATTTTGCCAAGTATAAGACATGTTCCTGAATCAAAATATTTTGTTGATCCTGGAACAACATTCCTGTCTGAAAATGTAATCCTAACCCTATCCCTACCCCTAAACCTCACCCTACCCATAACTGATCCCTAAAATCAGAGGGAAATGATAAGTGAATAACACTGATGTAGAAACACCGGTAACACTTTACAATAAGGTTCATTAACTAAACTTGACATAAACTGTAAACTTGTCTTTAAATTCTGATTATTTCATTGGAATGTTGTTCCATGATCAACAAAGATGTTGATCCAGGAACATGTTGTACTTGATGAAATCACGTTCACCGCGTATAACGCCATTGTGGTATCAGTACTTAAAGTACTTAAATGCTAGCTATAAACAACTACTGAATGCGCTTTTAAAATGTAGTAAATATAATATAAAATCAACAGTTACTTTGCAATTGTACTTTACGGATTGTTTCAGAAAATCTTTCAGTTGGAAAAGCCAGTCTTTTTTAAAAAGAGGAAAACTCCATATCCCATGTACGATCAAGCACAGCTGTAGTAAAGAATAAACTAAAGAGAATGTGTTACGCTTGTGGTTTGAAGCATAAAGATGGATCTGAAACTGATCACAGAAGAACAACCAGCAAAGCATGTTGAGCTCTAACATCTACAAGAGGGTTGGGGTGGAGGCAGAGAGCATTACTCCCTCTTTCCGTTCTGTGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198465 True 737 lncRNA 0.36 2 1022442 1023487

Neighbor

gene id symbol gene type direction distance location
CI01000037_00987906_00988350 NA coding upstream 34070 987859 ~ 989246 (+)
CI01000037_00874555_00887437 NA coding upstream 134425 874487 ~ 888017 (+)
CI01000037_00808744_00809273 NA coding upstream 212569 808744 ~ 809873 (+)
CI01000037_00796721_00807196 NA coding upstream 215108 795352 ~ 807334 (+)
CI01000037_00784200_00785176 NA coding upstream 237266 783585 ~ 785176 (+)
CI01000037_01075201_01076456 NA coding downstream 50487 1073974 ~ 1076489 (+)
CI01000037_01098540_01104541 NA coding downstream 74585 1098072 ~ 1105186 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 647399 1670886 ~ 1673145 (+)
CI01000037_01674415_01677266 TBA1A, TUBA1A.S, TUBA8L4, TUBA1A, TUBA8L3, TBA, TUBA4A coding downstream 650606 1674093 ~ 1677407 (+)
CI01000037_01685225_01686624 NA coding downstream 661738 1685225 ~ 1686738 (+)
G174712 NA non-coding upstream 40450 981701 ~ 981992 (+)
G174709 NA non-coding upstream 48154 973973 ~ 974288 (+)
G174676 NA non-coding upstream 170036 852144 ~ 852406 (+)
G174675 NA non-coding upstream 170960 849889 ~ 851482 (+)
G174674 NA non-coding upstream 173799 848305 ~ 848643 (+)
G174742 NA non-coding downstream 11963 1035450 ~ 1035773 (+)
G174743 NA non-coding downstream 15591 1039078 ~ 1073857 (+)
G174776 NA non-coding downstream 59953 1083440 ~ 1083737 (+)
G174758 NA non-coding downstream 60601 1084088 ~ 1087438 (+)
G174789 NA non-coding downstream 171588 1195075 ~ 1233465 (+)
CI01000037_00228809_00230442 NA other upstream 792046 228809 ~ 230730 (+)
G174949 NA other downstream 590389 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 942255 1965603 ~ 1966435 (+)
G176346 NA other downstream 1816273 2839760 ~ 2840053 (+)
G176377 NA other downstream 1953375 2976862 ~ 3087968 (+)

Expression


Co-expression Network