CI01000039_03359162_03369982


Basic Information

Item Value
gene id CI01000039_03359162_03369982
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3358895 ~ 3370403 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_03359162_03369982.mRNA
GTATAAAGTCCATGTGAGCTGGCTTTTGCTAATTGCTCTGAGCTTATTAACTCAAATGTATTATTACAGAGGCAAAGTTCAATGCCCATATATTACAGCTGAGCTCTTGAGAAGCAATTTGCTTTTTAATATTTCATTACCGTTCATTCCTACCATGAAGTTTATTGAACAACTATACAGGTAAATGAGAATAATGAAGTAATTCATGTCTGCTGTAACAGTTGGCGCTAGTGAAACAGCAGAACTTTGGTCACTCTTAAGGGAATAATGGTAGATGAAGGAGACGTTTTGCCGCTTGTTTTCACTCAGGAGGATAATGAGGGCAGCTGCGAAGAGCGGCCTGCTGTGGAGGGCCATTTTAACTTCAATGGCTCCACTGACCCTGAAGAGCAACTGAGTCTTCATCTCAGCTTCACTCCTATTGAAGGAGATTTGGAAAATGGTAGTGACTTCATTCACCATCTGCAAAACAAGCTTGAAGTAATGATGGGTATTGGTTTACAGCCCATATTGGGCTGCGAGAGAACAGATCTTTGGCCTGAATCCTTCAGCCTTCATTATGGCACCTTGATGAAGGACGAAGAAGGAATCCGACACAATTATTCCTGCTCTAACCTCGCTCTCTCAACACACTTGATAAGCGAGTTGGGGGAAATGAGGAATTTTAATCAGATTCCTGACATCCTGCTCAGGGCTCCGTTGCAACTGGGCCACGGTTCTGAGCCAGCCGTCTCGGTGTGTGTCGTCACTTCGACCTCCATCAAAACCACCACGCTGAGAATTTCCCTTTTGGTCCTCGCTTTCACACCTTCACAAGCGCAATCCAAACTCCCCCTCAACCTCGACATGGAGTCTGTGTTAGCACATCCAGCTGAGAGAAAAGTCAACAGTCCTTTAATAGTTTTCATGAAGAGGTCTGGAGAGGAACTGGGCGTGTGGGAATGTAAGGAGGGTATTGCAACTTTCTTTGATTAAGTAAAAGTTATTATTGTGCATGTAATGTGTCAGGTACAGTATTTGCATGGTTTTAGCTTGGGGCTTCACAGGATAATTCTGAGTTAGCTTGGAAATTCAAAGGCATAATCATGTCAATACAAGCACAAGGAGCAAGTCAAGAGATTAGCCCAAGCCAAACACTTTGACAGCTATGAAATCCCCATACATCTTCTGCTAAATCCTTGTGTGTCTGAATGCTGTTTAAACTCATTGTACACAGTAAGTCAATGACATATATCTCCACTATTTAGTCAGAATCCTTTTCAATCCCCACATCAATTTGTTCTCTGATCACAATGATCCCATTTAATGCAATGCCAAGACAATATTGTCATCAAATGTGAATCTTAAAAGAAAAGTTCATTCAAACAGAGTGTTAACTGCTGTGGCGGGCGAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_03359162_03369982.mRNA True 1396 mRNA 0.42 6 3358895 3370403

Neighbor

gene id symbol gene type direction distance location
CI01000039_03352914_03354134 GAS1A coding upstream 4419 3351530 ~ 3354476 (+)
CI01000039_03181221_03188468 FBP2 coding upstream 169660 3180393 ~ 3189235 (+)
CI01000039_03170952_03179241 FBP1.S, F16P1, FBP1B, FBP1, FBP2, FBP1A coding upstream 179622 3169850 ~ 3179273 (+)
CI01000039_02934780_02935076 NA coding upstream 423665 2934635 ~ 2935230 (+)
CI01000039_02740498_02764324 NPFFR2A, NPFFR2 coding upstream 594067 2740242 ~ 2764828 (+)
CI01000039_03454189_03458136 NA coding downstream 83637 3454040 ~ 3458140 (+)
CI01000039_03596770_03597721 NA coding downstream 225594 3595997 ~ 3597726 (+)
CI01000039_03651436_03658228 NA coding downstream 281033 3651436 ~ 3658264 (+)
CI01000039_03659569_03662364 NA coding downstream 289166 3659569 ~ 3662652 (+)
CI01000039_03665710_03683733 NA coding downstream 294844 3665247 ~ 3683850 (+)
G179893 NA non-coding upstream 35288 3323338 ~ 3323607 (+)
G179883 NA non-coding upstream 77458 3280776 ~ 3281437 (+)
G179802 NA non-coding upstream 90667 3267812 ~ 3268228 (+)
G179876 NA non-coding upstream 91774 3266529 ~ 3267121 (+)
G179875 NA non-coding upstream 94792 3262870 ~ 3264103 (+)
G179909 NA non-coding downstream 1423 3371826 ~ 3372040 (+)
G179933 NA non-coding downstream 31631 3402034 ~ 3402456 (+)
G179900 NA non-coding downstream 38888 3409291 ~ 3410398 (+)
G179901 NA non-coding downstream 40604 3411007 ~ 3411431 (+)
G179899 NA non-coding downstream 41389 3411792 ~ 3414176 (+)
G179798 NA other upstream 226711 3129572 ~ 3132184 (+)
G179528 NA other upstream 860276 2497674 ~ 2498619 (+)
G178423 NA other upstream 2373143 966676 ~ 982406 (+)
G179903 NA other downstream 53634 3424037 ~ 3425555 (+)
CI01000039_04048342_04049635 NA other downstream 677890 4048079 ~ 4049972 (+)
G180149 NA other downstream 704473 4079419 ~ 4079563 (+)
G180156 NA other downstream 720595 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 853176 4223868 ~ 4224657 (+)

Expression


Co-expression Network