CI01000039_05231247_05234144


Basic Information

Item Value
gene id CI01000039_05231247_05234144
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 5231099 ~ 5234144 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_05231247_05234144.mRNA
GTACAAAAGTACTTTGAATTGCAGCCACTGAACCGAGGGAAGCAATGGATTTTTGCAGGCACCACAACGAACAACATGGAGACTGTGAGGGAGAGTTTCAGTCAACTCATCAGCCTTTTGGAAGAAAAGGAGATGACACACCCATTTACTTGGCACTGGTTTGAGCTGGAATACAAACTCTATCAATCAGTGTCCGCAACAGCTGCATTTGACAAGTCCCTGTCCGCCAGGCTTAAGCCCTCCAACTATCTGTGGAGACTCCTCCCCGTCTGCCACCTCACTCCTTGCCCAGCCACGCACTGCGGCCTCACCCCCTGCTTCCTGCTGTTGTGTTTGCTCAAAGGCGAGCTCGCCTCATCATTTAAGCCCTCTCAGTCTGAAATGGTAATGCATGACTCGTCGAGGAACCTTTTTTGTTTACAAGGAAAACAAAGCACGTTCGTTGGTGTTTTCTCAAACAGCGAATGTTTTGCTCTGCCTCAGTCCAAACAGCCGAGTAATCTCAAGCTTTCACAACCTGTTGAAGGGGCTTGCCCCTGTGGAAATGCAACAGATGTTCCCTTGACATCCATCTGGTCCTCGTGATCCAGTGCTGTGCCACACTGTGAAAGGTTTTTCTTTTTTAACAGTTTCAGCTTGTCCCCAGTCAGGGGGCCGATCTCCCGTGTCTTATGCATGACCGGGATACAGTGCCACCGGTGACTTTACTCAAAGCCCCGGGATTAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_05231247_05234144.mRNA True 733 mRNA 0.49 3 5231099 5234144

Neighbor

gene id symbol gene type direction distance location
CI01000039_05204187_05205884 NDUFS4 coding downstream 25215 5201021 ~ 5205884 (-)
CI01000039_05012573_05014491 NA coding downstream 216276 5012505 ~ 5014823 (-)
CI01000039_04917173_04926003 NA coding downstream 304796 4916312 ~ 4926303 (-)
CI01000039_04824285_04826474 SUB1B, SUB1 coding downstream 404625 4824124 ~ 4826474 (-)
CI01000039_04652941_04726975 ARID3C coding downstream 504124 4652941 ~ 4726975 (-)
CI01000039_05298355_05313755 NA coding upstream 64057 5298201 ~ 5313788 (-)
CI01000039_05327866_05343471 NA coding upstream 92464 5326608 ~ 5343471 (-)
CI01000039_05428966_05446948 NA coding upstream 193788 5427932 ~ 5446948 (-)
CI01000039_05564105_05568438 TMEM175 coding upstream 328828 5562972 ~ 5568720 (-)
CI01000039_05691143_05694780 BMP3 coding upstream 455974 5690118 ~ 5695149 (-)
G181385 NA non-coding downstream 84927 5145963 ~ 5146172 (-)
G181331 NA non-coding downstream 210672 5020192 ~ 5020427 (-)
G181330 NA non-coding downstream 210924 5019960 ~ 5020175 (-)
G181309 NA non-coding downstream 250051 4967014 ~ 4981048 (-)
G182348 NA non-coding upstream 147812 5381956 ~ 5382630 (-)
G182363 NA non-coding upstream 163679 5397823 ~ 5398031 (-)
G182364 NA non-coding upstream 163953 5398097 ~ 5398469 (-)
G182365 NA non-coding upstream 164905 5399049 ~ 5399774 (-)
G182411 NA non-coding upstream 260065 5494209 ~ 5495402 (-)
CI01000039_04478095_04490812 NA other downstream 740040 4478095 ~ 4491059 (-)
G180953 NA other downstream 841570 4384866 ~ 4389529 (-)
CI01000039_04240525_04242132 RPS27A, UBB, UBC other downstream 988695 4240357 ~ 4242404 (-)
G180346 NA other downstream 2873492 2357204 ~ 2357607 (-)
G182384 NA other upstream 222347 5456491 ~ 5469288 (-)
G182470 NA other upstream 401914 5636058 ~ 5636764 (-)
G182771 NA other upstream 1273811 6507955 ~ 6508433 (-)
G182827 NA other upstream 1400403 6634547 ~ 6635200 (-)
CI01000039_06647926_06651530 NA other upstream 1413383 6646544 ~ 6653449 (-)

Expression


Co-expression Network