CI01000039_06140153_06140625


Basic Information

Item Value
gene id CI01000039_06140153_06140625
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6140022 ~ 6141005 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_06140153_06140625.mRNA
AAAACAGCAAATGTTTCCCCAAGGCTTCTATGTGGTTTGAGTTTTGGTTTTTCTCAGATTAAAATTTTACTCTAGCTGGGGGTTCAGCATACTGTGAGATGTTGTGAGAAATCTCTTGCAATGAACTCCAGAAGATAACTCTTGAGTTTGGCTACCTGTCGCTCTCCCTTAAGTGCAGCCTCTGGCAGTCAGAATAATTCATGTTCAGACGTGATTCATTTTGACATTTAGGATTCAACACTTCATGCACTAAAATTTCATCCCATGCAGATCCACCAAAATCTGGAGGTTTCAGGAATGGAGATCTACTGTAGTGCGGGATGAACTGACAGGCCTTATTTCAAAGGTCAATTTTCGGTTGAAAGGCTCATAAAGTCTAGATGAGAAACATTTTGGGAAATCTCACGTCAGAGATTCAGCATCTCCATGTGGTTATCTGCACATCTGTGACTTCATTGCTTGCTATTGTTTCTATTGTGTTTTTGAACATGGCTCCCTCTGTGAATTCCCTGGAGACAAGTGGAGGTGAAACAACTGAGTGGCAAAACAAAGCCTCCACCATGTGGCCTGCCGCACAAGACGTCGGGACTGAGTTTGCACTTGTTTTCCTAGTACAAAGAGATCTTCACACATCAATTCTACAGGTCTTGGCTAAAGTCCCAACTGATAACAAGGGATCTAACATCAAGCCTCAGCCAAGGAAACTATCTTCCAATTCCACGTTCTTTAGCAGCATTTGATAATGAACTTAACTTGAGGCAAGCCCCTGGCTGGTTCATGCAACAAAATGAATAGCTTTTATAATCAGCATAATTTCAGTCCGGGGTGGCATTTATGAGAGTAATTTAGGCGTGATTTGTGATAAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_06140153_06140625.mRNA True 871 mRNA 0.41 2 6140022 6141005

Neighbor

gene id symbol gene type direction distance location
CI01000039_06030814_06112651 FRAS1 coding downstream 27371 6030469 ~ 6112651 (-)
CI01000039_06017701_06028281 ANXA3A coding downstream 111741 6017390 ~ 6028281 (-)
CI01000039_05985160_06000083 BMP2K coding downstream 139939 5984844 ~ 6000083 (-)
CI01000039_05978542_05979057 NA coding downstream 160965 5978190 ~ 5979057 (-)
CI01000039_05847139_05855129 NA coding downstream 284257 5847072 ~ 5855765 (-)
CI01000039_06143810_06145842 NA coding upstream 1524 6142529 ~ 6146367 (-)
CI01000039_06147845_06151337 NA coding upstream 6795 6147800 ~ 6151993 (-)
CI01000039_06179859_06180838 NA coding upstream 38699 6179704 ~ 6181037 (-)
CI01000039_06199595_06200036 NA coding upstream 58285 6197567 ~ 6200319 (-)
CI01000039_06214039_06214808 NA coding upstream 73016 6214021 ~ 6214842 (-)
G182644 NA non-coding downstream 122809 6017006 ~ 6017213 (-)
G182642 NA non-coding downstream 123976 6015657 ~ 6016046 (-)
G182624 NA non-coding downstream 195667 5944147 ~ 5944355 (-)
G182594 NA non-coding downstream 221038 5918719 ~ 5918984 (-)
G182583 NA non-coding downstream 264668 5874745 ~ 5875354 (-)
G182598 NA non-coding upstream 31771 6172776 ~ 6179437 (-)
G182669 NA non-coding upstream 94121 6235126 ~ 6235659 (-)
G182695 NA non-coding upstream 185626 6326631 ~ 6326842 (-)
G182710 NA non-coding upstream 242229 6383234 ~ 6383862 (-)
G182470 NA other downstream 503258 5636058 ~ 5636764 (-)
G182384 NA other downstream 670734 5456491 ~ 5469288 (-)
CI01000039_04478095_04490812 NA other downstream 1648963 4478095 ~ 4491059 (-)
G180953 NA other downstream 1750493 4384866 ~ 4389529 (-)
CI01000039_04240525_04242132 RPS27A, UBB, UBC other downstream 1897618 4240357 ~ 4242404 (-)
G182771 NA other upstream 366950 6507955 ~ 6508433 (-)
G182827 NA other upstream 493542 6634547 ~ 6635200 (-)
CI01000039_06647926_06651530 NA other upstream 506522 6646544 ~ 6653449 (-)
CI01000039_07134422_07137732 NA other upstream 993102 7134422 ~ 7137767 (-)
G183261 NA other upstream 1831111 7972116 ~ 7975045 (-)

Expression


Co-expression Network