CI01000039_06179859_06180838


Basic Information

Item Value
gene id CI01000039_06179859_06180838
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6179704 ~ 6181037 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_06179859_06180838.mRNA
AGTTTATGGTATTATATTTCCATCTCCTTTTAGAGTAAAGCTAGAAAGATATTTTCCCCTGACAACCAAAATTCCAACTCATATGCATGTTTTTTTTCCCCCCTTTATCACTTCCTCTTTTGAGCATCAATATAAACTGGGCCGAAGACGCCTTTAGTCACATAACTTGCTTCACTCTACATCTGATCTCATCTTCAACATGGCACTGAACTCTTATTTACTGCTGGCAGCTGCTGCCGTCTGCTGCTTCACAACCCTCAATGCATTCCCAATGGATGGCTTTATAGCCAATAACAGGTGTCAGTGTCTGACCACCAGCTCAACCGTAATCCCACCTCGACTATTCCAGAGGATTGAGATCCTGCCTCCAGGAGCACACTGTCGCAAAACCGAGATCTTGATTACCAAAAAGGACAACAGAACAGTTTGTATAAACCCTGATGCACCATGGATCAACAATTTCATCTCAAGAGTAATGAGAAGCAAAAGAGCTGTAAAGGAAACTGCTGTGCCCACTGTGGCATAAATCAATGTGGACAAGAACAACCGCAAGAAAGTTATTTTCCATTCTTTCAATTATTCCTTTCGTTCAACCAGCCAACTCAAGCTACTACAGCCACATTTTTTAAAAATGTTATTGTAGGCTGCCTACAAAACCTGTAATTATTTCTTTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_06179859_06180838.mRNA True 681 mRNA 0.41 4 6179704 6181037

Neighbor

gene id symbol gene type direction distance location
CI01000039_06147845_06151337 NA coding downstream 27711 6147800 ~ 6151993 (-)
CI01000039_06143810_06145842 NA coding downstream 33337 6142529 ~ 6146367 (-)
CI01000039_06140153_06140625 NA coding downstream 38699 6140022 ~ 6141005 (-)
CI01000039_06030814_06112651 FRAS1 coding downstream 67053 6030469 ~ 6112651 (-)
CI01000039_06017701_06028281 ANXA3A coding downstream 151423 6017390 ~ 6028281 (-)
CI01000039_06199595_06200036 NA coding upstream 18253 6197567 ~ 6200319 (-)
CI01000039_06214039_06214808 NA coding upstream 32984 6214021 ~ 6214842 (-)
CI01000039_06226196_06229364 NA coding upstream 45043 6226080 ~ 6230420 (-)
CI01000039_06240103_06241511 NA coding upstream 58562 6239599 ~ 6241791 (-)
CI01000039_06254464_06256853 MOGAT3B, MOGAT3 coding upstream 73381 6254418 ~ 6256853 (-)
G182598 NA non-coding downstream 267 6172776 ~ 6179437 (-)
G182644 NA non-coding downstream 162491 6017006 ~ 6017213 (-)
G182642 NA non-coding downstream 163658 6015657 ~ 6016046 (-)
G182624 NA non-coding downstream 235349 5944147 ~ 5944355 (-)
G182594 NA non-coding downstream 260720 5918719 ~ 5918984 (-)
G182669 NA non-coding upstream 54089 6235126 ~ 6235659 (-)
G182695 NA non-coding upstream 145594 6326631 ~ 6326842 (-)
G182710 NA non-coding upstream 202197 6383234 ~ 6383862 (-)
G182712 NA non-coding upstream 204312 6385349 ~ 6385664 (-)
G182470 NA other downstream 542940 5636058 ~ 5636764 (-)
G182384 NA other downstream 710416 5456491 ~ 5469288 (-)
CI01000039_04478095_04490812 NA other downstream 1688645 4478095 ~ 4491059 (-)
G180953 NA other downstream 1790175 4384866 ~ 4389529 (-)
CI01000039_04240525_04242132 RPS27A, UBB, UBC other downstream 1937300 4240357 ~ 4242404 (-)
G182771 NA other upstream 326918 6507955 ~ 6508433 (-)
G182827 NA other upstream 453510 6634547 ~ 6635200 (-)
CI01000039_06647926_06651530 NA other upstream 466490 6646544 ~ 6653449 (-)
CI01000039_07134422_07137732 NA other upstream 953070 7134422 ~ 7137767 (-)
G183261 NA other upstream 1791079 7972116 ~ 7975045 (-)

Expression


Co-expression Network