CI01000039_06214039_06214808


Basic Information

Item Value
gene id CI01000039_06214039_06214808
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6214021 ~ 6214842 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_06214039_06214808.mRNA
ATATTACTTCATACTGTCAATTTCAGAACTAAACATGGAGCAGAAAACTGATACTAGTCTCCCAGTTGACCTGCAGCACACCGATGTGACAGACAAACACAGAGATGAACGTCTTAGGATTACTGGAAATAAATATTTCATCCTTTTTCCTGGGAAGACATCTAAGACTCGAGAGAACATCATAAGAAATGTCCTTCAAAAAATACCAGATCTAAAGGAGGTGCCCACTGTAGCAGAGTGTGATTTCATTTTGGTTTTATGCATTATTGTTTCAAGGGCAGGAACTGACATTGATGCTGCAGTGAATGAACTTAATGCCCTTTCAGAGTCTAAAAAAGCTATCTTCATAGTACTTCATCACACATTTGACCCAGAGAAGACAGTACCAGACAGCAGCAGGCATGTGACCAGGACGGACACACTCACAGTGGACTGTCTGTTCTACGAGGATCAATTATTGATCTGTGATAGGAATCAAGAAGCTCTGAACAGAATTGAACAATCGTTTTCATCAAAGGTATCCAGTTTTTCAGGATAAATGATACATATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_06214039_06214808.mRNA True 556 mRNA 0.39 3 6214021 6214842

Neighbor

gene id symbol gene type direction distance location
CI01000039_06199595_06200036 NA coding downstream 13702 6197567 ~ 6200319 (-)
CI01000039_06179859_06180838 NA coding downstream 32984 6179704 ~ 6181037 (-)
CI01000039_06147845_06151337 NA coding downstream 62028 6147800 ~ 6151993 (-)
CI01000039_06143810_06145842 NA coding downstream 67654 6142529 ~ 6146367 (-)
CI01000039_06140153_06140625 NA coding downstream 73016 6140022 ~ 6141005 (-)
CI01000039_06226196_06229364 NA coding upstream 11238 6226080 ~ 6230420 (-)
CI01000039_06240103_06241511 NA coding upstream 24757 6239599 ~ 6241791 (-)
CI01000039_06254464_06256853 MOGAT3B, MOGAT3 coding upstream 39576 6254418 ~ 6256853 (-)
CI01000039_06322466_06325312 NA coding upstream 106281 6321123 ~ 6325312 (-)
CI01000039_06347202_06354469 NA coding upstream 132182 6347024 ~ 6354469 (-)
G182598 NA non-coding downstream 34584 6172776 ~ 6179437 (-)
G182644 NA non-coding downstream 196808 6017006 ~ 6017213 (-)
G182642 NA non-coding downstream 197975 6015657 ~ 6016046 (-)
G182624 NA non-coding downstream 269666 5944147 ~ 5944355 (-)
G182669 NA non-coding upstream 20284 6235126 ~ 6235659 (-)
G182695 NA non-coding upstream 111789 6326631 ~ 6326842 (-)
G182710 NA non-coding upstream 168392 6383234 ~ 6383862 (-)
G182712 NA non-coding upstream 170507 6385349 ~ 6385664 (-)
G182721 NA non-coding upstream 178762 6393604 ~ 6393840 (-)
G182470 NA other downstream 577257 5636058 ~ 5636764 (-)
G182384 NA other downstream 744733 5456491 ~ 5469288 (-)
CI01000039_04478095_04490812 NA other downstream 1722962 4478095 ~ 4491059 (-)
G180953 NA other downstream 1824492 4384866 ~ 4389529 (-)
CI01000039_04240525_04242132 RPS27A, UBB, UBC other downstream 1971617 4240357 ~ 4242404 (-)
G182771 NA other upstream 293113 6507955 ~ 6508433 (-)
G182827 NA other upstream 419705 6634547 ~ 6635200 (-)
CI01000039_06647926_06651530 NA other upstream 432685 6646544 ~ 6653449 (-)
CI01000039_07134422_07137732 NA other upstream 919265 7134422 ~ 7137767 (-)
G183261 NA other upstream 1757274 7972116 ~ 7975045 (-)

Expression


Co-expression Network