CI01000039_06517676_06525898


Basic Information

Item Value
gene id CI01000039_06517676_06525898
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6517526 ~ 6525947 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_06517676_06525898.mRNA
GAATAAAAGTAAGCTTCAACACTGACCGCACAGTGAAAACGGCTTCTATCAGAAGACAGGATAGGGCGGTTCAGACATCTGGAGGACATCATCGCTCTAAAGCTCCTGTTGCTGCCCTTTACGATGTAAAAACAGCAGTACTTCACAAGAATGATTGTTCTCGTCGTACTGATTTTCGGATGCGATTCATTTCTGCAGTGGATTTGGGATTTCATGTATGAGGAACGTCATGTGCTCCTCATGTCACCCCACTGGAGCGTGTGCGCAGCTTTCAGCACTCATCTAATCTTCTCTGCTCCCTTCATGCTTCTGGATGTGTTCAGTACACACGTCGAATGGATTCATAAATATAGGATACGCCGTGAAGTCGTTGGCTTGCAGCAGTGGTTTCGATGTGCTTCTCGAATTTTATGGAAATACATGGTTGGCGTTTTACCGTTAACTGCGCTGTTTCTGTCAATACGGCACATGAATTTCCCAGAAAGAGCACCGTCTTCATTCCATGCATTCAGGGAATGTGTCTCATGCATGCTCATGTTCGATACGCTGTTCTTCATGTTTCATTACACCATTCACAAAATTCCCTGGCTGTACCACAGTGTCCACCGCATTCACCATCTGAACAGAGACACTTTTGCTCTGGCAGCTCAAGACTCCAGTATTTCTGAACTTCTGTTTCTACAAACCCTTGCATTTATCAGTGCCATGCTGGTGGGCTGCCACCCTTTTAGTGAAATCCTTTTCCATCTGGTTAACACCTGGATGGCAGTGGAGGACCATTGTGGATATGACTTTCCTTGGGCACTGCATCGGTTGCTGCCATTTTTTGGTGGGGCGCCACACCACCTGGCCCACCATCAGCACTTTAAAGGGAACTTCGCCCCCTACTTCAGACACTGGGATTACATCTTTGGGACCTTATTGCCCATTCCAGTAAATGAAGGAGACATTTAATAAGGTGAATCCAGGTTAATTGGGCCATTATATGACAGTGAGATTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_06517676_06525898.mRNA True 1003 mRNA 0.46 2 6517526 6525947

Neighbor

gene id symbol gene type direction distance location
CI01000039_06472455_06491979 ERLIN2.S, ERLN2, ERLIN2 coding upstream 25064 6472455 ~ 6492462 (+)
CI01000039_06436994_06439467 PTGER4B coding upstream 77922 6436994 ~ 6439604 (+)
CI01000039_06313617_06317466 ATP1B2B coding upstream 198781 6313433 ~ 6318745 (+)
CI01000039_06288292_06297288 NYAP1 coding upstream 220080 6288162 ~ 6297446 (+)
CI01000039_06282705_06284628 NA coding upstream 232595 6281904 ~ 6284931 (+)
CI01000039_06584621_06616401 AR coding downstream 58674 6584621 ~ 6616401 (+)
CI01000039_06677303_06686187 AR coding downstream 151356 6677303 ~ 6686864 (+)
CI01000039_06729386_06739661 YIPF6 coding downstream 203439 6729386 ~ 6740315 (+)
CI01000039_06744598_06746185 NA coding downstream 218651 6744598 ~ 6746534 (+)
CI01000039_06808952_06821780 STARD8 coding downstream 283005 6808952 ~ 6821971 (+)
G181770 NA non-coding upstream 9023 6507892 ~ 6508503 (+)
G181768 NA non-coding upstream 11979 6505204 ~ 6505547 (+)
G181762 NA non-coding upstream 48956 6468342 ~ 6468570 (+)
G181755 NA non-coding upstream 82037 6435281 ~ 6435489 (+)
G181754 NA non-coding upstream 88112 6429140 ~ 6429414 (+)
G181781 NA non-coding downstream 5413 6531360 ~ 6531560 (+)
G181782 NA non-coding downstream 5911 6531858 ~ 6532130 (+)
G181786 NA non-coding downstream 8733 6534680 ~ 6534922 (+)
G181787 NA non-coding downstream 9118 6535065 ~ 6535439 (+)
G181788 NA non-coding downstream 9499 6535446 ~ 6535787 (+)
CI01000039_04829464_04847182 ZFR other upstream 1668963 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 2292869 4223868 ~ 4224657 (+)
G180156 NA other upstream 2425918 4090998 ~ 4091608 (+)
G180149 NA other upstream 2437963 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 2467554 4048079 ~ 4049972 (+)
CI01000039_07324920_07329407 NA other downstream 794737 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 1369929 7896773 ~ 7905162 (+)

Expression


Co-expression Network