CI01000039_07324920_07329407


Basic Information

Item Value
gene id CI01000039_07324920_07329407
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7324596 ~ 7329472 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07324920_07329407.mRNA
GTTTATATACCACCAAACCCTGCAAGCCATTGGCTGGCCCATTTTAGAGCTCACTGAAGTGTGATTGGCTGGCCCCGGTCTCCTATGCCCTGTTTAGTGTAAGAAAGGCTTCAATTTAGATCCCATGCATCTTAGATGAGGTGGCAGCTGTGGGTTGTGTCCCCCTCCACTCGCATATCCATTTACACTTCCCACCCCATACATAGCTTTCCAGTAGGGTTTAGGTTGGAGGAGGGGTGATGGGACATGAAGGGTCTGCCATGCTAAAAAGGCTGAGCAGCACTTTTGCCAAACATACCATGGATATCAGAAGTGCTCACGTCAGGCCGATGGCTTTGGAAAAAATCACCTGGTCTGTGAGGTGGTGTCAGAATGGTGTGCATGTGGGAGAGGGGAATGTGGAAGTGGAAGTGAGACTTGGACTTGAGAATGTCTTGCAAGGAATCTGCATGGAGAATTATATGTTGTGTATATGTGTCTATGGGTCCGGGGAGGCCATGTCATCATCATGTTCTGTAGTCTCTCTTAACAAGCAGTGGTGGCTAATAATATACTTGGCCTTTGGAAGGGCAGCAGACCCTGTAGATAGAGAATCCTACAGCTGCCAATCCTCAAAGACAGAACAAACACCATCTCTCCCTGATGGCCACCTGCTGCCACTGCAATCTGAAAACAAGAAAGGAGAGAGATGTGAGGATTATGAGAATGTGATAAGATAATCAATAAGATGAAAGAGTGCATCATTAATCATTTATTAATCAATAATTAACTACTGATTTATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07324920_07329407.mRNA False 784 mRNA 0.45 4 7324681 7329472

Neighbor

gene id symbol gene type direction distance location
CI01000039_07299805_07316808 MARK4A coding upstream 6706 7299805 ~ 7317975 (+)
CI01000039_07268272_07278840 EXOC3L2A coding upstream 45782 7268169 ~ 7278899 (+)
CI01000039_07259359_07263181 NA coding upstream 61053 7259230 ~ 7263628 (+)
CI01000039_07236216_07240207 DLB coding upstream 83467 7235981 ~ 7241214 (+)
CI01000039_07225211_07228164 NA coding upstream 95320 7224551 ~ 7229361 (+)
CI01000039_07332093_07361302 SLC8A2A coding downstream 131 7329603 ~ 7361326 (+)
CI01000039_07362633_07380267 HNRPL coding downstream 32760 7362232 ~ 7380499 (+)
CI01000039_07394034_07396192 CRX coding downstream 63321 7392793 ~ 7396259 (+)
CI01000039_07412923_07415375 NA coding downstream 83249 7412721 ~ 7415525 (+)
CI01000039_07425682_07427826 GJD1A coding downstream 96210 7425682 ~ 7427957 (+)
G181870 NA non-coding upstream 251660 7072199 ~ 7073021 (+)
G181897 NA non-coding upstream 356889 6967497 ~ 6967792 (+)
G181888 NA non-coding upstream 378295 6945502 ~ 6946386 (+)
G181855 NA non-coding upstream 409341 6915005 ~ 6915340 (+)
G181802 NA non-coding upstream 655032 6669314 ~ 6669649 (+)
G181991 NA non-coding downstream 9299 7338771 ~ 7339059 (+)
G181992 NA non-coding downstream 9618 7339090 ~ 7339315 (+)
G181995 NA non-coding downstream 11514 7340986 ~ 7341316 (+)
G181997 NA non-coding downstream 15789 7345261 ~ 7345498 (+)
G181998 NA non-coding downstream 17033 7346505 ~ 7346767 (+)
CI01000039_04829464_04847182 ZFR other upstream 2476118 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3100024 4223868 ~ 4224657 (+)
G180156 NA other upstream 3233073 4090998 ~ 4091608 (+)
G180149 NA other upstream 3245118 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 3274709 4048079 ~ 4049972 (+)
CI01000039_07898330_07904918 DPF2 other downstream 566404 7896773 ~ 7905162 (+)

Expression


Co-expression Network