CI01000039_07442137_07446489


Basic Information

Item Value
gene id CI01000039_07442137_07446489
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7441592 ~ 7447160 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07442137_07446489.mRNA
GCATATAATACAAAACAAACAATTAAAAGACGGATCAAATGACCACGCTGTTTATGCGCCTTGCATTTAATGACAGCTCAAATGAATAACCACTTGAAATTCCCCCAACAAATGCAACGCGATGGAATTCCCAAAGAAACTAATGTAACCGACAATTAATTATGTGCGTGCTACGCATGCGCGCCTCGACCCCTACGCATGCGCACTCCCCCACGGTGTCTGGTTACAAGAGTGGCTTTGGGAATTCCCCAGGAAAACACCTACGCATCCACACGGCCTTTTCTGGACAAACTGGACAACAGTAAGCCGCTCACAAGGTGAGCAATCTAGTTTTATAATGCTCCTGACATGGAGGGAATCTGAGGCTTGTGCGACAGCGCTTGCCGCTGTTGTTTGGGAATTTGTTCAGAAAGAGCTCATCTTGTTCCCCTAAAAACGATCCATCTGGATAGAAGCGAAAACGGCGTAAGCAGATAGCTGTTTGTCAAGAAAAGCAGTTTCTCTTATTACAGCTGGCGTCATTTCAACGAATGATTCATATATAAATGGAGGGGACGCAAGATATTCACGGTGAATCCCGAAGACAGAATGCACGGCCTGGACCGAGCTACACTGTGGAGAAACGGGGCGCCGTGGACGCTGCCCCGGAGGACTGGTGTGACAGCGGACTAGACTCCTTAAGCGGGGTCGGACTCGGTTTTGAGGGTCCCTACGGCACGTACACAGAGGCCGAGGAGATGTGGACATCTGGTCGATCTGTGTCTGACATCCCACCTTCGGACGAGTCCGACAACAGGAGCACCATGGATTGTGTGTCGATTGGCGGCGGAGAGAGGCTCGACTCTGCCATCGGGGACTCGATTAATGAGGATGCGGTGGTGGGGTGTCTCTCCGACGGGATCGGCACCATGATCCTAAGCGAGCCTGCAGGTACAGACAGACTGGCGGTCTCAGACACTGAGGAGGGTCGGACTCGGCAGCGGAGAGAAGAACTCTTCAAAACGCTCAACTTTCTGACAGAGGACGGTGACACGGTACTTCATTTGGCGCTGATTCATGAGCAGTGGGGTGTTGTTCAGTGCCTGCTTGAAGATATTGTGTTGGACAAGACCTGCACTCCTTACCTAGACATCCAAAATGACCTGGGACAGATAATTAAAATTCTCTCACGTACAACCAGTGGCGGATACTCAAAATGGATGATGGGTGGGCCTCTAAAGACTGCTCTACATTTAGCAGTCATCGTAGACCGGAGTGAGTGTGTTCGGGCACTGTTGTGGAGTGGAGCCAGTGCAGAGATCCAAGAGAGGGGCGGCAACACACCTTTACACCTGGCTGTCCGAGAGCTTCGCACAGAGTGTGTGAGAGAGCTCACCAGCTGCTCCCGGACCCCACCGGCGCACCTAAGTATCACCAATTATGCAGGTGTGAGTGCACTGCACCTGGCTGTACATAGGGGCAATTGTGACATCATGAAAATGCTGCTGGAAGCAGGAGCAGATGCCAATCAAAGGCGCTCGTATGCAGGCCACACCCCATACTACTATGCCCGTTACAGACCCAGCAAAGAGGTGCAGGCCATACTTAGTGTCTATGGGGCCACATACACACAGGACGATGAGGAAGAGGAGGAGTACATTGAGAGCGAGGAGGAGGAGTTTGATGATGTCATCATTAATGGACAGCGAGTGCTGTAGCTGTAAAACATGGACACTACTCTGCCATTAGACCCAGCTCCAGCCGAACGATTGTGGTGTCTGAGTATTTTTGGTGGAGGCTATTATGTGTGTCTGTGTGTGTGTATATTGTTTTAAGGTACAGTATGATGTCAGTATGCTGCTTCTGGTTCAAAGGAATACATAGCTAAATTCTGTTAGACATGGAGGATCTAGGTTATTTAAGCCTGACATCACGCAAAGTCTTTTTAAAGCTATAACAATGGAGGCAGCTTTTTATTTAGTAAAACCTCTCACTGGCTCATCTTGTGTATGGCATAAGTAAAGGGGTAGTTTGCCTAAAGATGAATATTGTTACCATTTACTCATCCTCATGATGTTTCAAACCTGTATGACTTTGTCTTCTGAAGAAGAGAATTTTAATTTTTCAAATAATTTTTTTTTTTTTTTTTTTTTTAATGATGTTTGGACAACATATCTATCAAATCTTTAAGTAAAATATCTTCTTTTGTGTTCCACAGAAGAATTAAAGTCATACATGTTTGGAATGACATGAGGATGAGTAAATGATTTCATTTTAGGGCGAACTATCGCTTTAAGAAATTCCCTGGATGATAGCAAACACCTTAGGCAAGCAGCATGGCTGCAATACTCCCACTAGTGGGTAGATCAGTTATGTCCACAACATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07442137_07446489.mRNA True 2368 mRNA 0.47 7 7441592 7447160

Neighbor

gene id symbol gene type direction distance location
CI01000039_07425682_07427826 GJD1A coding upstream 13635 7425682 ~ 7427957 (+)
CI01000039_07412923_07415375 NA coding upstream 26067 7412721 ~ 7415525 (+)
CI01000039_07394034_07396192 CRX coding upstream 45333 7392793 ~ 7396259 (+)
CI01000039_07362633_07380267 HNRPL coding upstream 61093 7362232 ~ 7380499 (+)
CI01000039_07332093_07361302 SLC8A2A coding upstream 80266 7329603 ~ 7361326 (+)
CI01000039_07460749_07461491 TPPP3, TPPP2 coding downstream 13437 7460597 ~ 7462025 (+)
CI01000039_07463037_07464915 NA coding downstream 15877 7463037 ~ 7465201 (+)
CI01000039_07469638_07472925 NA coding downstream 21763 7468923 ~ 7472996 (+)
CI01000039_07474049_07478088 TAGL, TAGLN2, TAGL2, TAGLN coding downstream 26591 7473751 ~ 7478606 (+)
CI01000039_07512584_07512877 NA coding downstream 65319 7512479 ~ 7512984 (+)
G181962 NA non-coding upstream 39292 7400581 ~ 7402300 (+)
G182014 NA non-coding upstream 41195 7400166 ~ 7400397 (+)
G182004 NA non-coding upstream 57283 7383566 ~ 7384309 (+)
G182000 NA non-coding upstream 91387 7349972 ~ 7350205 (+)
G181999 NA non-coding upstream 94390 7346805 ~ 7347202 (+)
G182067 NA non-coding downstream 34478 7481638 ~ 7482002 (+)
G182063 NA non-coding downstream 37935 7485095 ~ 7485424 (+)
G182054 NA non-coding downstream 62432 7509592 ~ 7511146 (+)
G182051 NA non-coding downstream 68136 7515296 ~ 7515637 (+)
G182048 NA non-coding downstream 71866 7519026 ~ 7526562 (+)
CI01000039_07324920_07329407 NA other upstream 116895 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2593029 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3216935 4223868 ~ 4224657 (+)
G180156 NA other upstream 3349984 4090998 ~ 4091608 (+)
G180149 NA other upstream 3362029 4079419 ~ 4079563 (+)
CI01000039_07898330_07904918 DPF2 other downstream 448716 7896773 ~ 7905162 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location