CI01000039_07463037_07464915


Basic Information

Item Value
gene id CI01000039_07463037_07464915
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7463037 ~ 7465201 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07463037_07464915.mRNA
AAGAAGGAGGAGTGCTGTCAGAATATAAAGCTGAACACAACACAGACTCTGATTTTCACTTGCTCCCACTGAGACTCAAAAGGAAAACAGAAACAGCTGTGAGACATGAAAGCAAAGGACCTACAACTGGGACGCGCCAGGACAAACCCTCCCTCCAGATCCCATCAACCAGGAAAAAATGGCAGTTAGAAGAATATTTAAACTCTAGTATGAATTCACTGGAGGATTCGCTGGCCAGAGCACAAAACACACTGAGAAACATTAGAGAGAATCGAGTGGCATTTTCTGTGGGTCTAACCGACAGGAGACGTTGTATTGGTCCAGTGAGGACGGCAATAAATGTGGTCTATCAGAGCATCTTTATCAACATTGGAGAGGCCTATAACTCATCCACTGGTGTGTTCACGGTTCCACGGTCAGGCGTGTATAACCTGGCATTTACCGTGTTCAGTGACGCAGGCTCACCAGGTGCACTGCTCTCCATCTGTACCAGTATCAGGAGGAATGGTGTGGCTCTAGCAGCACTTAGGGAGGTGTATGGTCAAGACCAGGAGGACCAGGCCACAGCTGTCTTACTTGCACAGCTCAGCGTAGGAGACCGTATTACCATCAGTCTCCAGACTGGCTGCTGGCTCTGTGATGATCAGAATCATTACAACACATTCAGTGGATTTCTGCTGTATGCTACAGAGTGAAGCACACAAACATAGACTATTAAACCTATATTAGTGAGGAGCTCTCATAGATGCAATGGTTTTCATACTATCCTAAACCTAAATATCACACAAACCTGTTGACGCTATTAAATTTGAAGCAAAACTTGATTTGGCAAATTTTATTTCAGTTAGTGAGGATCACTTTAAATGTCCTCACATGTTAGTTTTCAACATGTTTCACTATATTTGTAAGGGTGGTTTTTAACTATTTGACACACTCACACACACACTTATTGTAAGATAGAAGAATGTTGAACTAACATTA

Function

NR:

description
complement C1q-like factor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07463037_07464915.mRNA True 981 mRNA 0.43 4 7463037 7465201

Neighbor

gene id symbol gene type direction distance location
CI01000039_07460749_07461491 TPPP3, TPPP2 coding upstream 1012 7460597 ~ 7462025 (+)
CI01000039_07442137_07446489 NA coding upstream 15877 7441592 ~ 7447160 (+)
CI01000039_07425682_07427826 GJD1A coding upstream 35080 7425682 ~ 7427957 (+)
CI01000039_07412923_07415375 NA coding upstream 47512 7412721 ~ 7415525 (+)
CI01000039_07394034_07396192 CRX coding upstream 66778 7392793 ~ 7396259 (+)
CI01000039_07469638_07472925 NA coding downstream 3722 7468923 ~ 7472996 (+)
CI01000039_07474049_07478088 TAGL, TAGLN2, TAGL2, TAGLN coding downstream 8550 7473751 ~ 7478606 (+)
CI01000039_07512584_07512877 NA coding downstream 47278 7512479 ~ 7512984 (+)
CI01000039_07604862_07616660 NA coding downstream 139661 7604862 ~ 7616660 (+)
CI01000039_07673393_07690390 KLHL13 coding downstream 208192 7673393 ~ 7691259 (+)
G181962 NA non-coding upstream 60737 7400581 ~ 7402300 (+)
G182014 NA non-coding upstream 62640 7400166 ~ 7400397 (+)
G182004 NA non-coding upstream 78728 7383566 ~ 7384309 (+)
G182000 NA non-coding upstream 112832 7349972 ~ 7350205 (+)
G181999 NA non-coding upstream 115835 7346805 ~ 7347202 (+)
G182067 NA non-coding downstream 16437 7481638 ~ 7482002 (+)
G182063 NA non-coding downstream 19894 7485095 ~ 7485424 (+)
G182054 NA non-coding downstream 44391 7509592 ~ 7511146 (+)
G182051 NA non-coding downstream 50095 7515296 ~ 7515637 (+)
G182048 NA non-coding downstream 53825 7519026 ~ 7526562 (+)
CI01000039_07324920_07329407 NA other upstream 138340 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2614474 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3238380 4223868 ~ 4224657 (+)
G180156 NA other upstream 3371429 4090998 ~ 4091608 (+)
G180149 NA other upstream 3383474 4079419 ~ 4079563 (+)
CI01000039_07898330_07904918 DPF2 other downstream 430675 7896773 ~ 7905162 (+)

Expression


Co-expression Network